Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HOXD12P35452 MRPL42P3-201ENST00000401492 326 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 MIR1261-201ENST00000408659 82 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 RNU2-23P-201ENST00000410545 195 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 RNA5SP21-201ENST00000410917 96 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXD12P35452 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXD12P35452 EIF1AXP1-201ENST00000419267 435 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 AC007098.1-201ENST00000420122 367 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 MTCYBP10-201ENST00000424905 650 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD12P35452 AL353705.4-201ENST00000449661 238 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 RN7SKP210-201ENST00000459176 261 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD12P35452 RNU6-1045P-201ENST00000516321 107 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 MIR4658-201ENST00000584344 65 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 AL590808.1-201ENST00000618696 141 ntBASIC2.82□□□□□ -1.96
HOXD12P35452 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD12P35452 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HOXD12P35452 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HOXD12P35452 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXD12P35452 Y_RNA.80-201ENST00000362996 102 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 AC117470.1-201ENST00000381974 330 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 RNU6-1286P-201ENST00000383871 107 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 Y_RNA.485-201ENST00000384395 102 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 MTCO3P29-201ENST00000432119 779 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 GPM6BP3-201ENST00000442797 145 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 AC112771.1-201ENST00000463581 102 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.81□□□□□ -1.96
HOXD12P35452 UBL5P3-201ENST00000475112 231 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 RPL30P10-201ENST00000488148 337 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 RPL30P1-201ENST00000488676 339 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 RPL23AP75-201ENST00000491601 451 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 AC021146.2-201ENST00000504736 556 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 RNU7-175P-201ENST00000515915 61 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 RNU6-1137P-201ENST00000517073 99 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.81□□□□□ -1.96
HOXD12P35452 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HOXD12P35452 AC079598.5-201ENST00000547460 117 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXD12P35452 AC105137.2-201ENST00000569073 466 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXD12P35452 RPS15AP11-201ENST00000594193 385 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 AL049779.4-201ENST00000604500 156 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 AC007792.1-201ENST00000623023 402 ntBASIC2.81□□□□□ -1.96
HOXD12P35452 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXD12P35452 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXD12P35452 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HOXD12P35452 AC002543.1-201ENST00000299783 1954 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 Y_RNA.39-201ENST00000362620 98 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 Y_RNA.158-201ENST00000363651 101 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 RNY3P11-201ENST00000364153 102 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 Y_RNA.405-201ENST00000383979 100 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 RNU1-138P-201ENST00000384093 164 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 Y_RNA.451-201ENST00000384200 100 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 SNORA70B-201ENST00000384210 135 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 Y_RNA.524-201ENST00000384564 100 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 Y_RNA.561-201ENST00000384694 100 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HOXD12P35452 AL138827.1-201ENST00000402666 306 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 Y_RNA.605-201ENST00000410577 105 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 RNU2-63P-201ENST00000410792 194 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 CYCSP48-201ENST00000417124 323 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 AC096644.2-201ENST00000429278 159 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 ARL5AP4-201ENST00000430731 512 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXD12P35452 Z82188.1-201ENST00000436709 154 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 RNU7-169P-201ENST00000459456 61 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 HMGN1P10-201ENST00000474557 553 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 AC090525.1-201ENST00000479116 478 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 TRBV12-1-201ENST00000479785 344 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 CKS1BP2-201ENST00000497342 240 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 AC016632.1-201ENST00000503994 196 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXD12P35452 RNU4-77P-201ENST00000516692 156 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 RNU7-4P-201ENST00000516961 62 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXD12P35452 AC027176.1-201ENST00000560204 514 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXD12P35452 MIR4446-201ENST00000578505 67 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 AC008737.2-201ENST00000599446 118 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 MIR5739-201ENST00000619803 80 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 SNORA43.4-201ENST00000629559 138 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 AL606534.2-204ENST00000635008 178 ntBASIC2.8□□□□□ -1.96
HOXD12P35452 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
HOXD12P35452 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HOXD12P35452 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.79□□□□□ -1.96
HOXD12P35452 AC005592.1-201ENST00000566527 1640 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 SNORD114-19-201ENST00000363072 75 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 U3.13-201ENST00000364804 214 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 RNU4-9P-201ENST00000364951 139 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 RNA5SP240-201ENST00000365355 128 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 SNORA29-201ENST00000384183 140 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 SNORA12.2-201ENST00000391040 156 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 MTCYBP2-201ENST00000407745 171 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 RN7SKP61-201ENST00000410642 295 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 AC113618.1-201ENST00000416747 285 ntBASIC2.79□□□□□ -1.96
HOXD12P35452 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.79□□□□□ -1.96
HOXD12P35452 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.79□□□□□ -1.96
HOXD12P35452 AL358453.1-201ENST00000422522 250 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms