Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNU1-54P-201ENST00000517181 120 ntBASIC2.17□□□□□ -2.06
CDH3P22223 RNU6-586P-201ENST00000517265 104 ntBASIC2.17□□□□□ -2.06
CDH3P22223 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH3P22223 AC105029.1-201ENST00000520250 669 ntBASIC2.17□□□□□ -2.06
CDH3P22223 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.17□□□□□ -2.06
CDH3P22223 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH3P22223 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH3P22223 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDH3P22223 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH3P22223 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH3P22223 MIR1273D-201ENST00000577266 86 ntBASIC2.17□□□□□ -2.06
CDH3P22223 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
CDH3P22223 MIR4448-201ENST00000584360 86 ntBASIC2.17□□□□□ -2.06
CDH3P22223 Z98751.3-201ENST00000604447 521 ntBASIC2.17□□□□□ -2.06
CDH3P22223 AL670379.2-201ENST00000604983 252 ntBASIC2.17□□□□□ -2.06
CDH3P22223 AC018462.2-201ENST00000605375 395 ntBASIC2.17□□□□□ -2.06
CDH3P22223 AC009994.1-201ENST00000606889 253 ntBASIC2.17□□□□□ -2.06
CDH3P22223 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.17□□□□□ -2.06
CDH3P22223 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH3P22223 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.17□□□□□ -2.06
CDH3P22223 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDH3P22223 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CDH3P22223 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH3P22223 RNU1-23P-201ENST00000363361 144 ntBASIC2.16□□□□□ -2.06
CDH3P22223 Y_RNA.142-201ENST00000363491 102 ntBASIC2.16□□□□□ -2.06
CDH3P22223 RNU6-944P-201ENST00000364023 107 ntBASIC2.16□□□□□ -2.06
CDH3P22223 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH3P22223 RNU6-1286P-201ENST00000383871 107 ntBASIC2.16□□□□□ -2.06
CDH3P22223 RNU6-842P-201ENST00000384269 107 ntBASIC2.16□□□□□ -2.06
CDH3P22223 Y_RNA.473-201ENST00000384333 102 ntBASIC2.16□□□□□ -2.06
CDH3P22223 Y_RNA.474-201ENST00000384341 102 ntBASIC2.16□□□□□ -2.06
CDH3P22223 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDH3P22223 RNA5SP201-201ENST00000410316 124 ntBASIC2.16□□□□□ -2.06
CDH3P22223 RPL37P10-201ENST00000412884 288 ntBASIC2.16□□□□□ -2.06
CDH3P22223 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH3P22223 EIF1AXP1-201ENST00000419267 435 ntBASIC2.16□□□□□ -2.06
CDH3P22223 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH3P22223 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.16□□□□□ -2.06
CDH3P22223 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDH3P22223 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH3P22223 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH3P22223 AC026782.1-201ENST00000512952 449 ntBASIC2.16□□□□□ -2.06
CDH3P22223 Y_RNA.702-201ENST00000516843 96 ntBASIC2.16□□□□□ -2.06
CDH3P22223 SNORA48.11-201ENST00000517015 89 ntBASIC2.16□□□□□ -2.06
CDH3P22223 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH3P22223 AC016256.1-201ENST00000547971 354 ntBASIC2.16□□□□□ -2.06
CDH3P22223 SNRPGP18-201ENST00000553000 214 ntBASIC2.16□□□□□ -2.06
CDH3P22223 AC021231.3-201ENST00000558497 370 ntBASIC2.16□□□□□ -2.06
CDH3P22223 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH3P22223 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.16□□□□□ -2.06
CDH3P22223 FGF7P1-201ENST00000582820 288 ntBASIC2.16□□□□□ -2.06
CDH3P22223 AC104260.1-201ENST00000616660 539 ntBASIC2.16□□□□□ -2.06
CDH3P22223 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDH3P22223 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH3P22223 MTND5P6-201ENST00000422338 1798 ntBASIC2.15□□□□□ -2.06
CDH3P22223 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CDH3P22223 MTND4P12-201ENST00000498999 1377 ntBASIC2.15□□□□□ -2.07
CDH3P22223 RNU5B-2P-201ENST00000363036 113 ntBASIC2.15□□□□□ -2.07
CDH3P22223 RNA5SP240-201ENST00000365355 128 ntBASIC2.15□□□□□ -2.07
CDH3P22223 RNU6-968P-201ENST00000384076 107 ntBASIC2.15□□□□□ -2.07
CDH3P22223 SNORA29-201ENST00000384183 140 ntBASIC2.15□□□□□ -2.07
CDH3P22223 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CDH3P22223 RNU6-174P-201ENST00000410406 106 ntBASIC2.15□□□□□ -2.07
CDH3P22223 RNU2-63P-201ENST00000410792 194 ntBASIC2.15□□□□□ -2.07
CDH3P22223 AL513124.1-201ENST00000450410 614 ntBASIC2.15□□□□□ -2.07
CDH3P22223 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH3P22223 CYP2C59P-201ENST00000457790 269 ntBASIC2.15□□□□□ -2.07
CDH3P22223 FO393415.2-201ENST00000480085 343 ntBASIC2.15□□□□□ -2.07
CDH3P22223 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH3P22223 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH3P22223 AC021146.2-201ENST00000504736 556 ntBASIC2.15□□□□□ -2.07
CDH3P22223 AC005741.1-201ENST00000511094 432 ntBASIC2.15□□□□□ -2.07
CDH3P22223 ACA59.1-201ENST00000515966 143 ntBASIC2.15□□□□□ -2.07
CDH3P22223 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.15□□□□□ -2.07
CDH3P22223 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH3P22223 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH3P22223 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
CDH3P22223 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH3P22223 AC009318.2-201ENST00000610917 651 ntBASIC2.15□□□□□ -2.07
CDH3P22223 AC063943.3-201ENST00000615562 356 ntBASIC2.15□□□□□ -2.07
CDH3P22223 AC008121.3-201ENST00000618726 433 ntBASIC2.15□□□□□ -2.07
CDH3P22223 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
CDH3P22223 AC091932.3-201ENST00000624223 323 ntBASIC2.15□□□□□ -2.07
CDH3P22223 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH3P22223 RNU6-593P-201ENST00000364716 112 ntBASIC2.14□□□□□ -2.07
CDH3P22223 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
CDH3P22223 RNU6-596P-201ENST00000365395 98 ntBASIC2.14□□□□□ -2.07
CDH3P22223 Y_RNA.482-201ENST00000384377 111 ntBASIC2.14□□□□□ -2.07
CDH3P22223 RNU6-601P-201ENST00000384540 107 ntBASIC2.14□□□□□ -2.07
CDH3P22223 MIR29B2-201ENST00000385055 81 ntBASIC2.14□□□□□ -2.07
CDH3P22223 MTCYBP2-201ENST00000407745 171 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC018634.1-201ENST00000437554 401 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC096638.1-201ENST00000444678 216 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH3P22223 AF186996.7-201ENST00000492781 209 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC145146.1-201ENST00000496370 254 ntBASIC2.14□□□□□ -2.07
CDH3P22223 CKS1BP2-201ENST00000497342 240 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH3P22223 RNU1-41P-201ENST00000516161 162 ntBASIC2.14□□□□□ -2.07
CDH3P22223 Y_RNA.670-201ENST00000516255 105 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 7 ms