Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL035666.1-201ENST00000446195 348 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 PMCHL2-203ENST00000457791 237 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 RNU1-131P-201ENST00000458943 161 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 AC130509.1-201ENST00000464158 433 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 RNU6-1314P-201ENST00000517139 104 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 AL627230.6-201ENST00000611129 280 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CAPN3P20807 AC090617.10-201ENST00000624308 134 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 AC100810.6-201ENST00000638068 285 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 AC027514.1-201ENST00000588561 1603 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.28□□□□□ -2.04
CAPN3P20807 RNA5SP276-201ENST00000362580 94 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 RNU5B-2P-201ENST00000363036 113 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 Y_RNA.135-201ENST00000363439 95 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.28□□□□□ -2.04
CAPN3P20807 RNU6-95P-201ENST00000384697 107 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 U3.40-201ENST00000408706 208 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 AC096920.1-201ENST00000423991 241 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.28□□□□□ -2.04
CAPN3P20807 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.28□□□□□ -2.04
CAPN3P20807 RPL23AP3-201ENST00000453844 468 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.28□□□□□ -2.04
CAPN3P20807 snoU13.6-201ENST00000458785 104 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 MTCYBP18-201ENST00000501056 747 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.28□□□□□ -2.04
CAPN3P20807 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 PRELID2P1-201ENST00000552837 301 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 ANP32BP3-201ENST00000559213 706 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 AL109918.3-201ENST00000603072 338 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 7SK.7-201ENST00000603504 247 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 MIR3976-201ENST00000606807 139 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.28□□□□□ -2.04
CAPN3P20807 AL162373.1-201ENST00000620433 407 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 AL160394.1-201ENST00000624765 724 ntBASIC2.28□□□□□ -2.04
CAPN3P20807 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CAPN3P20807 AC009487.4-201ENST00000624969 3585 ntBASIC2.28□□□□□ -2.05
CAPN3P20807 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CAPN3P20807 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 Y_RNA.132-201ENST00000363421 102 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 Y_RNA.212-201ENST00000364177 102 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 MIR300-201ENST00000401138 83 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 RN7SKP223-201ENST00000410582 62 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 AC007395.1-201ENST00000451333 677 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 OR2AQ1P-201ENST00000451972 200 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.27□□□□□ -2.05
CAPN3P20807 RNA5SP458-201ENST00000516188 119 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 RNU6-1098P-201ENST00000516772 96 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 AC087441.2-201ENST00000529141 262 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 SNRPGP20-201ENST00000604477 205 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 AC124303.1-201ENST00000605703 360 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 AC019193.3-201ENST00000609144 554 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 AC005296.1-201ENST00000616145 209 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 AC005562.2-201ENST00000618264 111 ntBASIC2.27□□□□□ -2.05
CAPN3P20807 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CAPN3P20807 CBX3P1-201ENST00000325243 554 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 Y_RNA.151-201ENST00000363566 112 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 SNORD116-11-201ENST00000383882 92 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 MIR517A-201ENST00000385001 87 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 RNU6-192P-201ENST00000391253 100 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 AL356432.1-201ENST00000405809 419 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 AL139396.1-201ENST00000421137 167 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 AL513185.2-201ENST00000425543 193 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.26□□□□□ -2.05
CAPN3P20807 AC092989.1-201ENST00000481235 277 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 MTCO2P30-201ENST00000503662 364 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 MRPS17P9-201ENST00000511924 393 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.26□□□□□ -2.05
CAPN3P20807 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.26□□□□□ -2.05
CAPN3P20807 RNU6-718P-201ENST00000516166 105 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.26□□□□□ -2.05
CAPN3P20807 MRPS36P4-201ENST00000534436 298 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.26□□□□□ -2.05
CAPN3P20807 MIR1273D-201ENST00000577266 86 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 MIR3672-201ENST00000584290 82 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 AL353997.5-201ENST00000618886 171 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 AC091932.3-201ENST00000624223 323 ntBASIC2.26□□□□□ -2.05
CAPN3P20807 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CAPN3P20807 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CAPN3P20807 AC016717.2-201ENST00000609089 5141 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.25□□□□□ -2.05
CAPN3P20807 MIR597-201ENST00000384968 97 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CAPN3P20807 MIR548F1-201ENST00000408667 84 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 AC009963.1-201ENST00000417265 157 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 AC244636.1-201ENST00000421152 228 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 EIF4EP2-201ENST00000422816 654 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 AC027124.2-201ENST00000428249 105 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 AC074290.1-201ENST00000448883 135 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 AC016925.1-201ENST00000458303 298 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 AC087477.1-201ENST00000465747 340 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 RNU6-864P-201ENST00000516256 108 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 RNU6-1198P-201ENST00000516904 67 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.25□□□□□ -2.05
CAPN3P20807 AC005786.1-201ENST00000588553 154 ntBASIC2.25□□□□□ -2.05
CAPN3P20807 AL773524.1-201ENST00000614065 229 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms