Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 Y_RNA.105-201ENST00000363182 111 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 Y_RNA.193-201ENST00000363979 102 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 Y_RNA.396-201ENST00000383949 103 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 RNU6-1145P-201ENST00000384246 107 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.93□□□□□ -1.78
ERCC3P19447 RPL21P38-201ENST00000418090 167 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.93□□□□□ -1.78
ERCC3P19447 RPS27P29-201ENST00000463110 252 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 AC091179.3-201ENST00000474761 144 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 AC098869.1-201ENST00000481627 292 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.93□□□□□ -1.78
ERCC3P19447 MIR449C-201ENST00000516047 92 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 AC006006.1-201ENST00000603082 144 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 AC073657.2-201ENST00000605661 303 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 TCL6_2.1-201ENST00000615162 119 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 AC010205.1-201ENST00000616668 449 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ERCC3P19447 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ERCC3P19447 Z83843.1-201ENST00000604070 3685 ntBASIC3.93□□□□□ -1.78
ERCC3P19447 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ERCC3P19447 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.93□□□□□ -1.78
ERCC3P19447 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ERCC3P19447 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ERCC3P19447 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ERCC3P19447 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
ERCC3P19447 Y_RNA.498-201ENST00000384460 102 ntBASIC3.92□□□□□ -1.78
ERCC3P19447 Y_RNA.556-201ENST00000384677 113 ntBASIC3.92□□□□□ -1.78
ERCC3P19447 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.92□□□□□ -1.78
ERCC3P19447 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.92□□□□□ -1.78
ERCC3P19447 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.92□□□□□ -1.78
ERCC3P19447 AL049873.1-201ENST00000480540 376 ntBASIC3.92□□□□□ -1.78
ERCC3P19447 RNU5F-4P-201ENST00000516581 114 ntBASIC3.92□□□□□ -1.78
ERCC3P19447 MIR4738-201ENST00000579134 87 ntBASIC3.92□□□□□ -1.78
ERCC3P19447 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.92□□□□□ -1.78
ERCC3P19447 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.92□□□□□ -1.78
ERCC3P19447 MFSD8-233ENST00000641482 4860 ntBASIC3.92□□□□□ -1.78
ERCC3P19447 PWAR6-201ENST00000552334 4618 ntBASIC3.92□□□□□ -1.78
ERCC3P19447 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ERCC3P19447 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
ERCC3P19447 SNORA72.2-201ENST00000365028 127 ntBASIC3.91□□□□□ -1.78
ERCC3P19447 FO393413.1-201ENST00000402892 195 ntBASIC3.91□□□□□ -1.78
ERCC3P19447 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.91□□□□□ -1.78
ERCC3P19447 IFNA11P-201ENST00000446352 526 ntBASIC3.91□□□□□ -1.78
ERCC3P19447 AP001486.1-201ENST00000463339 476 ntBASIC3.91□□□□□ -1.78
ERCC3P19447 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.91□□□□□ -1.78
ERCC3P19447 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.91□□□□□ -1.78
ERCC3P19447 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
ERCC3P19447 AL357075.2-201ENST00000614906 189 ntBASIC3.91□□□□□ -1.78
ERCC3P19447 MIR5739-201ENST00000619803 80 ntBASIC3.91□□□□□ -1.78
ERCC3P19447 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.91□□□□□ -1.78
ERCC3P19447 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
ERCC3P19447 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.9□□□□□ -1.78
ERCC3P19447 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ERCC3P19447 Y_RNA.376-201ENST00000365638 108 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 RNU6-1274P-201ENST00000384557 107 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 MRPL35P1-201ENST00000404272 572 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 MIR1294-201ENST00000408503 142 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 U6atac.2-201ENST00000408644 118 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.9□□□□□ -1.79
ERCC3P19447 AC006028.1-201ENST00000438379 402 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.9□□□□□ -1.79
ERCC3P19447 RNU6-625P-201ENST00000459412 107 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.9□□□□□ -1.79
ERCC3P19447 AC136932.1-201ENST00000574771 208 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 MIR5004-201ENST00000579078 107 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 MIR4325-201ENST00000583049 90 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 AL713866.2-201ENST00000603579 219 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 LINC02555-201ENST00000563933 1951 ntBASIC3.9□□□□□ -1.79
ERCC3P19447 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.9□□□□□ -1.79
ERCC3P19447 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC3P19447 RNU6-626P-201ENST00000363354 107 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 RNA5SP197-201ENST00000363357 119 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 Y_RNA.288-201ENST00000364854 92 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 RNU6-805P-201ENST00000365643 106 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 AL357075.1-201ENST00000404107 726 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 RNU6-121P-201ENST00000410525 99 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 AC126124.2-201ENST00000413542 321 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 AC104332.2-201ENST00000429959 156 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 RPS23P5-201ENST00000495419 428 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 RNU7-110P-201ENST00000516891 62 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 RNA5SP380-201ENST00000517190 98 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC3P19447 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC3P19447 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.89□□□□□ -1.79
ERCC3P19447 MIR4300-201ENST00000581016 96 ntBASIC3.89□□□□□ -1.79
ERCC3P19447 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC3P19447 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.89□□□□□ -1.79
ERCC3P19447 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC3P19447 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC3P19447 AC093908.1-201ENST00000623125 8092 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC3P19447 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ERCC3P19447 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC3P19447 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC3P19447 RNU1-62P-201ENST00000362599 164 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 RNU6-961P-201ENST00000363893 105 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 RNU6-944P-201ENST00000364023 107 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 Y_RNA.415-201ENST00000384012 112 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 RNU6-20P-201ENST00000384106 107 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms