Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC006445.1-201ENST00000491925 405 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 SNORA40.9-201ENST00000515895 93 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 RNU5F-2P-201ENST00000516066 82 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN1P18031 MIR4423-201ENST00000580922 80 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 UBL5P2-201ENST00000583788 219 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 AL391813.1-201ENST00000603098 260 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 AL137843.1-201ENST00000605078 385 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 AC005000.2-201ENST00000605468 310 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 SNORD113-5-201ENST00000607261 78 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 AC010999.1-201ENST00000611856 324 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 SNORA50A-202ENST00000629536 136 ntBASIC3.35□□□□□ -1.87
PTPN1P18031 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.35□□□□□ -1.87
PTPN1P18031 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTPN1P18031 ZNF204P-201ENST00000416749 2397 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PTPN1P18031 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPN1P18031 RNU6-1266P-201ENST00000362794 105 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 SNORD114-19-201ENST00000363072 75 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 RNU6-529P-201ENST00000363383 104 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 RNU6-200P-201ENST00000364743 107 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 U3.26-201ENST00000391236 204 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN1P18031 AC010095.1-201ENST00000443543 144 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPN1P18031 AC073901.1-201ENST00000462471 408 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 AC007215.1-201ENST00000464893 276 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 GZMAP1-201ENST00000503054 631 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 SEPT14P8-201ENST00000508026 178 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 AK6P2-201ENST00000549020 471 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 AL034555.1-201ENST00000604816 211 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 BX284668.6-201ENST00000606899 438 ntBASIC3.34□□□□□ -1.87
PTPN1P18031 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPN1P18031 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
PTPN1P18031 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN1P18031 RNU6-626P-201ENST00000363354 107 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 Y_RNA.277-201ENST00000364754 102 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 RNU6-20P-201ENST00000384106 107 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 SNORD15B-201ENST00000384714 146 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 SNORA48.2-201ENST00000390926 124 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 MIR208B-201ENST00000401172 77 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 AL033519.2-201ENST00000403958 392 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 RNU4-30P-201ENST00000410245 143 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 Y_RNA.595-201ENST00000410403 105 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 Z92545.1-201ENST00000411782 234 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN1P18031 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN1P18031 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN1P18031 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN1P18031 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 snoU13.14-201ENST00000459372 104 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 AC117440.1-201ENST00000474107 571 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 SERF1AP1-201ENST00000514575 187 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 RNU6-138P-201ENST00000515952 107 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 SNORA25.14-201ENST00000516481 132 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 RNU7-110P-201ENST00000516891 62 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 SCARNA20.6-201ENST00000517251 106 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPN1P18031 AC104027.1-201ENST00000521887 300 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 MIR3923-201ENST00000579521 83 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPN1P18031 AC009779.6-201ENST00000603972 165 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 AC005520.5-201ENST00000613926 164 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPN1P18031 U2.14-201ENST00000615943 113 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 AC127459.3-201ENST00000624328 466 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPN1P18031 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 BX322639.1-202ENST00000423987 2213 ntBASIC3.33□□□□□ -1.88
PTPN1P18031 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PTPN1P18031 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPN1P18031 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPN1P18031 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PTPN1P18031 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN1P18031 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN1P18031 Y_RNA.40-201ENST00000362645 93 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 Y_RNA.65-201ENST00000362846 100 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 RNU6-961P-201ENST00000363893 105 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN1P18031 RNU6-21P-201ENST00000384710 107 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 MIR128-1-201ENST00000384921 82 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 SNORD58.1-201ENST00000391313 66 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 SNORA48.8-201ENST00000391324 134 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.32□□□□□ -1.88
PTPN1P18031 RNU4-71P-201ENST00000516258 113 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 Y_RNA.683-201ENST00000516508 93 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.32□□□□□ -1.88
PTPN1P18031 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN1P18031 AL356575.1-201ENST00000603008 283 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 AL357075.2-201ENST00000614906 189 ntBASIC3.32□□□□□ -1.88
PTPN1P18031 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN1P18031 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN1P18031 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN1P18031 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN1P18031 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN1P18031 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN1P18031 SNORD56.3-201ENST00000363507 71 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 RNU6-799P-201ENST00000363567 107 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 Y_RNA.179-201ENST00000363844 90 ntBASIC3.31□□□□□ -1.88
PTPN1P18031 Y_RNA.230-201ENST00000364348 109 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms