Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.71□□□□□ -2.52
HMGA1P17096 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.71□□□□□ -2.52
HMGA1P17096 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.71□□□□□ -2.52
HMGA1P17096 RNU7-56P-201ENST00000458744 62 ntBASIC-0.71□□□□□ -2.52
HMGA1P17096 AC013828.1-201ENST00000481845 158 ntBASIC-0.71□□□□□ -2.52
HMGA1P17096 MTND2P33-201ENST00000506452 1031 ntBASIC-0.71□□□□□ -2.52
HMGA1P17096 RNU6-416P-201ENST00000516265 103 ntBASIC-0.71□□□□□ -2.52
HMGA1P17096 AP002001.1-203ENST00000534002 267 ntBASIC-0.71□□□□□ -2.52
HMGA1P17096 RNU4-84P-201ENST00000364200 139 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 RNU4-76P-201ENST00000364509 141 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 SNORA72.2-201ENST00000365028 127 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 RNU6-127P-201ENST00000390897 107 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 MIR892B-201ENST00000401279 77 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 RNU6-77P-201ENST00000410554 91 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 MTND4P32-201ENST00000437189 1237 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 AC004854.1-201ENST00000440356 349 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.72□□□□□ -2.52
HMGA1P17096 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.72□□□□□ -2.52
HMGA1P17096 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.72□□□□□ -2.52
HMGA1P17096 AC026782.1-201ENST00000512952 449 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.72□□□□□ -2.52
HMGA1P17096 uc_338.16-201ENST00000621804 95 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 SCARNA4-202ENST00000625402 129 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 AC099654.9-201ENST00000637055 678 ntBASIC-0.72□□□□□ -2.52
HMGA1P17096 SNORA33-201ENST00000363664 130 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 RNY4P16-201ENST00000364768 94 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 RNU6-843P-201ENST00000384454 104 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 AL451046.2-201ENST00000403074 277 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 RNU2-23P-201ENST00000410545 195 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.73□□□□□ -2.53
HMGA1P17096 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.73□□□□□ -2.53
HMGA1P17096 MRPL42P4-201ENST00000453267 443 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 snoU13.21-201ENST00000459368 105 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 RNA5SP337-201ENST00000517007 109 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 AC091163.3-201ENST00000518269 1144 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 AC027288.2-201ENST00000553028 243 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.73□□□□□ -2.53
HMGA1P17096 AC004223.2-201ENST00000590309 544 ntBASIC-0.73□□□□□ -2.53
HMGA1P17096 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.74□□□□□ -2.53
HMGA1P17096 RNU6-188P-201ENST00000364207 107 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 RNU6-438P-201ENST00000365561 103 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 SNORA12.2-201ENST00000391040 156 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 SNORA75.6-201ENST00000391318 127 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.74□□□□□ -2.53
HMGA1P17096 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 AC060773.1-201ENST00000421698 310 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 RAC1P6-201ENST00000423911 575 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 AL590632.1-201ENST00000424289 371 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 AL133217.1-201ENST00000450980 425 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.74□□□□□ -2.53
HMGA1P17096 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.74□□□□□ -2.53
HMGA1P17096 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.74□□□□□ -2.53
HMGA1P17096 AC090502.2-201ENST00000549267 280 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 MIR548AO-201ENST00000579992 96 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 AC087685.1-201ENST00000587507 141 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 AC098679.4-201ENST00000624241 654 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 AL359697.1-201ENST00000624879 587 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.74□□□□□ -2.53
HMGA1P17096 U6.101-201ENST00000637707 76 ntBASIC-0.74□□□□□ -2.53
HMGA1P17096 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.74□□□□□ -2.53
HMGA1P17096 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.75□□□□□ -2.53
HMGA1P17096 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.75□□□□□ -2.53
HMGA1P17096 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
HMGA1P17096 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.75□□□□□ -2.53
HMGA1P17096 AC110760.3-202ENST00000515177 371 ntBASIC-0.75□□□□□ -2.53
HMGA1P17096 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.75□□□□□ -2.53
HMGA1P17096 AC010376.1-201ENST00000522101 334 ntBASIC-0.75□□□□□ -2.53
HMGA1P17096 MIR3612-201ENST00000579753 87 ntBASIC-0.75□□□□□ -2.53
HMGA1P17096 BCRP9-201ENST00000605312 388 ntBASIC-0.75□□□□□ -2.53
HMGA1P17096 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.75□□□□□ -2.53
HMGA1P17096 AL096861.1-201ENST00000610899 123 ntBASIC-0.75□□□□□ -2.53
HMGA1P17096 AC008147.4-201ENST00000617570 1204 ntBASIC-0.75□□□□□ -2.53
HMGA1P17096 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.75□□□□□ -2.53
HMGA1P17096 MIR6079-201ENST00000635807 62 ntBASIC-0.75□□□□□ -2.53
HMGA1P17096 SNORD118-201ENST00000363593 134 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 MIR653-201ENST00000385279 96 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 RNA5SP300-201ENST00000391197 107 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 MIR548H2-201ENST00000408874 88 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 RNU2-28P-201ENST00000410457 189 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 RNU6-575P-201ENST00000411326 105 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 RNU6-57P-201ENST00000411348 103 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 AC013262.1-201ENST00000426710 252 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 VN1R10P-201ENST00000447106 875 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 MTND1P9-201ENST00000453775 944 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.76□□□□□ -2.53
HMGA1P17096 RNU7-159P-201ENST00000459284 62 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.76□□□□□ -2.53
HMGA1P17096 RNU6-138P-201ENST00000515952 107 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 AC090049.2-201ENST00000550377 109 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.76□□□□□ -2.53
HMGA1P17096 AC093519.1-201ENST00000566109 298 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 AL391903.3-201ENST00000612158 163 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 AL391099.1-201ENST00000624635 187 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 AL356094.1-201ENST00000624663 1212 ntBASIC-0.76□□□□□ -2.53
HMGA1P17096 AC019226.1-201ENST00000625666 515 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 561.8 ms