Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RN7SKP61-201ENST00000410642 295 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 RNU2-49P-201ENST00000410666 184 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 PTGES3P4-201ENST00000426243 356 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 NDUFB1P1-201ENST00000435191 180 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 AC107626.1-201ENST00000471084 183 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 RPL30P12-201ENST00000474666 353 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 SNORD19.2-201ENST00000516978 73 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 IGKV2-26-201ENST00000518305 343 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 MIR5680-201ENST00000577577 84 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 MIR6852-201ENST00000621699 66 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 AC092628.2-201ENST00000622492 339 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 MAPK10-253ENST00000641010 4072 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.127-201ENST00000363386 109 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.182-201ENST00000363880 111 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.357-201ENST00000365487 109 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-19P-201ENST00000384718 107 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 RNA5SP39-201ENST00000411245 120 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 PHBP14-201ENST00000512887 367 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-1333P-201ENST00000516162 93 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 RNA5SP154-201ENST00000516193 111 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-58P-201ENST00000517143 103 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 MIR5571-201ENST00000577998 113 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 AC091152.3-201ENST00000604227 325 ntBASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSB-PGBD3P0DP91 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC010680.1-201ENST00000590024 3590 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 RNA5SP295-201ENST00000362655 121 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.71-201ENST00000362892 104 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.75-201ENST00000362927 97 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 MIR93-201ENST00000385024 80 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 MIR1183-201ENST00000408856 89 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC004552.1-201ENST00000419089 348 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC078809.1-201ENST00000427601 140 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC244670.1-201ENST00000436879 112 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC005042.3-201ENST00000453230 174 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 RPS26P3-201ENST00000470205 348 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC090543.2-201ENST00000483963 348 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC004057.1-201ENST00000485827 348 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC005840.1-201ENST00000498412 377 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 MIR3684-201ENST00000579779 74 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AL359881.1-201ENST00000602916 267 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 AL359198.2-201ENST00000611836 194 ntBASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSB-PGBD3P0DP91 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AC092268.1-201ENST00000342691 405 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-1325P-201ENST00000364905 105 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 SNORA36A-201ENST00000384221 132 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 MIR513A2-201ENST00000385249 127 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 SNORA40-201ENST00000388090 126 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AC138623.1-201ENST00000418060 216 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AC010154.1-201ENST00000425857 269 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 MTND4LP9-201ENST00000427694 174 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AL137159.1-201ENST00000452808 512 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 DEFB131C-201ENST00000528817 165 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 MIR548X2-201ENST00000579776 100 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 MIR4325-201ENST00000583049 90 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AC012531.5-201ENST00000611375 151 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 AC093908.1-201ENST00000623125 8092 ntBASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CSB-PGBD3P0DP91 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.65□□□□□ -1.66
CSB-PGBD3P0DP91 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CSB-PGBD3P0DP91 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-1272P-201ENST00000362776 107 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-748P-201ENST00000384648 107 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 BTF3P11-201ENST00000426582 477 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 AC006028.1-201ENST00000438379 402 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 RPS27P26-201ENST00000494583 239 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 RPL23AP94-201ENST00000512518 302 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 SNORA31.1-201ENST00000515993 133 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms