Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-295P-201ENST00000516901 104 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 AC016256.1-201ENST00000547971 354 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 HMGB1P33-201ENST00000563485 527 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 AC022254.1-201ENST00000567857 235 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 AC011494.1-201ENST00000596454 237 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 RPL17P51-201ENST00000605218 238 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-89P-201ENST00000606519 100 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 AC004492.1-201ENST00000607036 742 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 AC092954.2-201ENST00000609103 430 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 FAM157A-202ENST00000615155 405 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 AC121333.1-201ENST00000567488 2709 ntBASIC1.37□□□□□ -2.19
IGHV3-43DP0DP04 RNU1-76P-201ENST00000362903 159 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 Y_RNA.123-201ENST00000363338 102 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 RNU4-24P-201ENST00000364565 139 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 RNU4-75P-201ENST00000364621 146 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 SNORA29-201ENST00000384183 140 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 MIR504-201ENST00000385065 83 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 SNORA12.2-201ENST00000391040 156 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 MIR450B-201ENST00000401182 78 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-325P-201ENST00000411132 105 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 OOSP1P1-201ENST00000423265 274 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 AL513124.1-201ENST00000450410 614 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 RPS23P5-201ENST00000495419 428 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 GNAI2P1-201ENST00000541815 315 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 AC245505.1-201ENST00000556398 224 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 MIR3122-201ENST00000577243 73 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 AC005786.1-201ENST00000588553 154 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 AC010525.2-201ENST00000590920 195 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 DISC2.1-201ENST00000612827 205 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
IGHV3-43DP0DP04 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 MIR340-201ENST00000362125 95 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 SNORA18.2-201ENST00000383865 132 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-933P-201ENST00000384424 107 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 Y_RNA.517-201ENST00000384551 106 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 MIR521-1-201ENST00000384902 87 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 AL627390.1-201ENST00000396055 340 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 RNA5SP494-201ENST00000410653 129 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 RN7SKP101-201ENST00000411376 320 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 MTCO1P29-201ENST00000496868 288 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 AC116337.1-201ENST00000509680 687 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-250P-201ENST00000516958 103 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 AC100830.2-201ENST00000581636 240 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 MIR502-201ENST00000606349 86 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 RMST_6.1-201ENST00000611980 203 ntBASIC1.35□□□□□ -2.19
IGHV3-43DP0DP04 Y_RNA.373-201ENST00000365600 103 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-1286P-201ENST00000383871 107 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-968P-201ENST00000384076 107 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 MIR1289-2-201ENST00000408360 111 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-908P-201ENST00000410160 94 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 RNA5SP100-201ENST00000410903 110 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 RNA5SP59-201ENST00000410922 110 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AL030996.1-201ENST00000411430 235 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 DLGAP5P1-201ENST00000430307 464 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 USP9YP28-201ENST00000435142 589 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC016925.1-201ENST00000458303 298 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 HMGB3P17-201ENST00000504195 649 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC097473.1-201ENST00000508142 408 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 SNORA25.15-201ENST00000516487 89 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-506P-201ENST00000516553 94 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 RNU6-314P-201ENST00000516574 104 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC026371.1-201ENST00000551867 419 ntBASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.34□□□□□ -2.19
IGHV3-43DP0DP04 AC080013.6-201ENST00000606185 215 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 712.4 ms