Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.54□□□□□ -2.32
UBBP0CG47 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
UBBP0CG47 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.54□□□□□ -2.32
UBBP0CG47 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.54□□□□□ -2.32
UBBP0CG47 AL390123.1-201ENST00000603216 237 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 AC009878.1-201ENST00000621819 340 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 AL133216.2-202ENST00000634512 349 ntBASIC0.54□□□□□ -2.32
UBBP0CG47 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.54□□□□□ -2.32
UBBP0CG47 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.54□□□□□ -2.32
UBBP0CG47 RNU6-545P-201ENST00000362681 104 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 RNU6-877P-201ENST00000383868 107 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 RNU6-418P-201ENST00000384035 107 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 RNU6-116P-201ENST00000384042 109 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 RNU2-8P-201ENST00000410727 190 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.53□□□□□ -2.32
UBBP0CG47 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.53□□□□□ -2.32
UBBP0CG47 AL606517.2-201ENST00000442855 241 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 AL162395.1-201ENST00000457882 422 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.53□□□□□ -2.32
UBBP0CG47 AC092991.1-201ENST00000477176 376 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 TRBVA-201ENST00000498804 316 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
UBBP0CG47 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.53□□□□□ -2.32
UBBP0CG47 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.53□□□□□ -2.32
UBBP0CG47 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.53□□□□□ -2.32
UBBP0CG47 RNA5SP458-201ENST00000516188 119 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 RN7SKP265-201ENST00000516448 223 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 SNORA31.10-201ENST00000516482 106 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 RNU2-34P-201ENST00000516534 121 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 AP003072.2-201ENST00000527756 676 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 MTCO3P23-201ENST00000561363 289 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.53□□□□□ -2.32
UBBP0CG47 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.53□□□□□ -2.32
UBBP0CG47 AC008751.2-201ENST00000597885 980 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 AC112191.3-201ENST00000604371 277 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 AP001836.1-201ENST00000604675 523 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 Z99289.3-201ENST00000605586 594 ntBASIC0.53□□□□□ -2.32
UBBP0CG47 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.53□□□□□ -2.32
UBBP0CG47 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
UBBP0CG47 MIR373-201ENST00000362273 69 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 snoU2-30.2-201ENST00000362805 70 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 Y_RNA.363-201ENST00000365529 113 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 MIR513B-201ENST00000385136 84 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AP000275.1-201ENST00000411943 390 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 HMGN1P14-201ENST00000412459 517 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 COX6CP10-201ENST00000416832 224 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 MTCO2P34-201ENST00000421994 607 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.52□□□□□ -2.33
UBBP0CG47 AC011233.1-201ENST00000422812 283 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.52□□□□□ -2.33
UBBP0CG47 AC002486.1-201ENST00000435098 391 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AC104850.1-201ENST00000435940 476 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.52□□□□□ -2.33
UBBP0CG47 AL512286.1-201ENST00000439244 400 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 EPS15P1-201ENST00000448836 336 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 SNORD124-201ENST00000459577 104 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.52□□□□□ -2.33
UBBP0CG47 HMGN1P7-201ENST00000491722 313 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AC008628.2-201ENST00000502605 298 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AC016632.1-201ENST00000503994 196 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.52□□□□□ -2.33
UBBP0CG47 AF131216.2-201ENST00000512316 564 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 RNA5SP168-201ENST00000516642 112 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.52□□□□□ -2.33
UBBP0CG47 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.52□□□□□ -2.33
UBBP0CG47 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.52□□□□□ -2.33
UBBP0CG47 PCMTD1P2-201ENST00000565017 355 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AC090517.1-201ENST00000569307 266 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AC022418.1-201ENST00000624118 445 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AP002371.2-201ENST00000624450 503 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 U6.108-201ENST00000637764 58 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AC006927.3-201ENST00000638789 384 ntBASIC0.52□□□□□ -2.33
UBBP0CG47 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.52□□□□□ -2.33
UBBP0CG47 RNU6-562P-201ENST00000362731 107 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 RNU4-79P-201ENST00000362764 141 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 RNU4-56P-201ENST00000364700 142 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 SNORA72.2-201ENST00000365028 127 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 RNA5SP259-201ENST00000365541 109 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 SNORA20.2-201ENST00000383922 131 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 RNU6-74P-201ENST00000384235 107 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 RPL21P1-201ENST00000399532 476 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 MIR1283-1-201ENST00000408494 87 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 RNU6-733P-201ENST00000410759 104 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 RNU6-1054P-201ENST00000411293 104 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 AC004866.1-201ENST00000411748 78 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 AL008987.1-201ENST00000415528 237 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 MTCO2P23-201ENST00000425216 680 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 AL356583.2-201ENST00000426536 280 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.51□□□□□ -2.33
UBBP0CG47 RNU7-34P-201ENST00000459394 64 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 RNU6-1178P-201ENST00000516674 107 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 RNU2-46P-201ENST00000517038 113 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.51□□□□□ -2.33
UBBP0CG47 AC022878.1-201ENST00000530684 149 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 AL590705.4-201ENST00000532209 134 ntBASIC0.51□□□□□ -2.33
UBBP0CG47 TMF1P1-201ENST00000576058 373 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms