Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 AC064859.1-201ENST00000624741 174 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 SCARNA4-201ENST00000629045 128 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 SNORA43.4-201ENST00000629559 138 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNRPA1P09661 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNRPA1P09661 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNRPA1P09661 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
SNRPA1P09661 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SNRPA1P09661 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
SNRPA1P09661 RNU6-222P-201ENST00000362438 107 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 Y_RNA.396-201ENST00000383949 103 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 RNU6-198P-201ENST00000384258 104 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 RNU6-1222P-201ENST00000384615 107 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 RNU6-713P-201ENST00000384761 107 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 AL139095.1-201ENST00000404326 391 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 RPS15AP5-201ENST00000436276 388 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 AL714022.1-201ENST00000439897 151 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.24□□□□□ -1.89
SNRPA1P09661 AL161651.1-201ENST00000440882 223 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 AC012308.1-201ENST00000451232 178 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.24□□□□□ -1.89
SNRPA1P09661 AP001025.1-201ENST00000486139 332 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 AF186996.7-201ENST00000492781 209 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 SNORA25.11-201ENST00000515935 105 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 RNY3P15-201ENST00000516297 97 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.24□□□□□ -1.89
SNRPA1P09661 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.24□□□□□ -1.89
SNRPA1P09661 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.24□□□□□ -1.89
SNRPA1P09661 RPL23AP88-201ENST00000605759 454 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 AC107871.2-201ENST00000612894 502 ntBASIC3.24□□□□□ -1.89
SNRPA1P09661 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.24□□□□□ -1.89
SNRPA1P09661 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.24□□□□□ -1.89
SNRPA1P09661 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.23□□□□□ -1.89
SNRPA1P09661 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.23□□□□□ -1.89
SNRPA1P09661 Z75746.1-201ENST00000440243 2080 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNRPA1P09661 Y_RNA.64-201ENST00000362845 102 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.23□□□□□ -1.89
SNRPA1P09661 Y_RNA.504-201ENST00000384481 104 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 MIR32-201ENST00000384965 70 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 RPL21P75-201ENST00000396599 483 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 RPL21P28-201ENST00000401418 483 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 AL590004.2-201ENST00000404787 371 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 RNU2-49P-201ENST00000410666 184 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNRPA1P09661 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.23□□□□□ -1.89
SNRPA1P09661 EIF1AXP1-201ENST00000419267 435 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 AL590556.1-201ENST00000423231 483 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 RPL23AP95-201ENST00000426806 265 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 CBX3P6-201ENST00000430257 527 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 USP9YP16-201ENST00000430287 407 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 USP9YP23-201ENST00000455085 407 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.23□□□□□ -1.89
SNRPA1P09661 RPL21P39-201ENST00000463605 483 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 AC087190.1-201ENST00000484462 480 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 AC107032.1-201ENST00000485945 480 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 AC132942.1-201ENST00000486753 483 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 AC093591.1-201ENST00000491435 481 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 RPL21P16-201ENST00000495531 483 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 ANXA2P1-201ENST00000505539 926 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 SNORA40.15-201ENST00000516884 107 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 RNU6-897P-201ENST00000517135 105 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.23□□□□□ -1.89
SNRPA1P09661 HSPE1P4-201ENST00000550617 308 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 AC078899.3-201ENST00000599065 212 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 MIR8062-201ENST00000621515 85 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 AC108206.1-201ENST00000570186 4159 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 RBBP8P1-201ENST00000449447 1844 ntBASIC3.23□□□□□ -1.89
SNRPA1P09661 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNRPA1P09661 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 SNORA29-201ENST00000384183 140 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 SNORA70B-201ENST00000384210 135 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 RNU6-843P-201ENST00000384454 104 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 SNORA3.2-201ENST00000408221 125 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 RNU6-1140P-201ENST00000410517 106 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 Y_RNA.618-201ENST00000410949 107 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 RNU6-130P-201ENST00000411112 103 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 AC244505.4-201ENST00000434905 287 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 RPEP5-201ENST00000441137 268 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 SSXP5-201ENST00000443473 287 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.22□□□□□ -1.89
SNRPA1P09661 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 AC087477.1-201ENST00000465747 340 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 RPL30P12-201ENST00000474666 353 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 AC104564.1-201ENST00000493028 407 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 AC010469.2-201ENST00000496412 480 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.22□□□□□ -1.89
SNRPA1P09661 RNU5F-8P-201ENST00000515941 111 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 AC034114.1-201ENST00000520293 285 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.22□□□□□ -1.89
SNRPA1P09661 AC125232.2-201ENST00000592457 143 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 MIR3529-201ENST00000637713 78 ntBASIC3.22□□□□□ -1.89
SNRPA1P09661 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SNRPA1P09661 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
SNRPA1P09661 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.21□□□□□ -1.9
SNRPA1P09661 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNRPA1P09661 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.21□□□□□ -1.9
SNRPA1P09661 Y_RNA.19-201ENST00000362462 99 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms