Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RNU4-52P-201ENST00000384209 138 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 Y_RNA.453-201ENST00000384223 109 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 SNORD115-47-201ENST00000391226 86 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 MIR1283-1-201ENST00000408494 87 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 MTND1P23-201ENST00000416931 372 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 AC009161.1-201ENST00000417306 376 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 RPL21P111-201ENST00000418453 477 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGB1P09429 MTCO1P44-201ENST00000441935 243 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 MTCO3P8-201ENST00000453691 755 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGB1P09429 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGB1P09429 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGB1P09429 AC137590.2-201ENST00000619709 240 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 AC022513.1-201ENST00000624512 117 ntBASIC2.81□□□□□ -1.96
HMGB1P09429 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.81□□□□□ -1.96
HMGB1P09429 Y_RNA.212-201ENST00000364177 102 ntBASIC2.8□□□□□ -1.96
HMGB1P09429 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGB1P09429 AL139415.2-201ENST00000431968 163 ntBASIC2.8□□□□□ -1.96
HMGB1P09429 ATP5J2P3-201ENST00000451550 258 ntBASIC2.8□□□□□ -1.96
HMGB1P09429 MTCYBP18-201ENST00000501056 747 ntBASIC2.8□□□□□ -1.96
HMGB1P09429 MTCO2P30-201ENST00000503662 364 ntBASIC2.8□□□□□ -1.96
HMGB1P09429 ACA59.1-201ENST00000515966 143 ntBASIC2.8□□□□□ -1.96
HMGB1P09429 SNRPGP20-201ENST00000604477 205 ntBASIC2.8□□□□□ -1.96
HMGB1P09429 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
HMGB1P09429 MIR487A-201ENST00000385009 80 ntBASIC2.79□□□□□ -1.96
HMGB1P09429 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HMGB1P09429 MIR320B2-201ENST00000408479 138 ntBASIC2.79□□□□□ -1.96
HMGB1P09429 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.79□□□□□ -1.96
HMGB1P09429 AL513328.1-201ENST00000446460 224 ntBASIC2.79□□□□□ -1.96
HMGB1P09429 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGB1P09429 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGB1P09429 AC021269.2-201ENST00000532318 330 ntBASIC2.79□□□□□ -1.96
HMGB1P09429 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGB1P09429 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGB1P09429 AC013412.1-201ENST00000610687 192 ntBASIC2.79□□□□□ -1.96
HMGB1P09429 U4.5-201ENST00000617137 123 ntBASIC2.79□□□□□ -1.96
HMGB1P09429 MIR3662-201ENST00000637030 95 ntBASIC2.79□□□□□ -1.96
HMGB1P09429 ZNF204P-201ENST00000416749 2397 ntBASIC2.79□□□□□ -1.96
HMGB1P09429 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGB1P09429 SNORD50.1-201ENST00000362987 71 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGB1P09429 HMGN2P38-201ENST00000423806 265 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 AL513185.2-201ENST00000425543 193 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 MTCO3P46-201ENST00000425787 232 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 AC092989.1-201ENST00000481235 277 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 AC010409.1-201ENST00000487382 476 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 AC079804.2-201ENST00000490376 200 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 AC234781.5-201ENST00000508429 271 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HMGB1P09429 RNU6-1041P-201ENST00000516254 102 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 SNORA31.17-201ENST00000516953 127 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 RRN3P3-201ENST00000549207 578 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGB1P09429 MIR5007-201ENST00000583098 95 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 AC103810.8-201ENST00000607347 118 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGB1P09429 AL359697.1-201ENST00000624879 587 ntBASIC2.78□□□□□ -1.96
HMGB1P09429 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGB1P09429 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGB1P09429 RNU6-534P-201ENST00000364877 106 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 RNU6-301P-201ENST00000384277 107 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 SNORA11.4-201ENST00000408823 129 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 HSPE1P21-201ENST00000438283 308 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 DAP3P1-201ENST00000441522 278 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 RN7SL636P-201ENST00000497504 294 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 AC087241.2-201ENST00000535801 324 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 SUB1P4-201ENST00000566062 339 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 MIR3942-201ENST00000585264 109 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 AC124303.1-201ENST00000605703 360 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 AC006504.8-201ENST00000621046 635 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 SCARNA4-201ENST00000629045 128 ntBASIC2.77□□□□□ -1.97
HMGB1P09429 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
HMGB1P09429 RNU6-862P-201ENST00000362804 105 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 SNORD116-11-201ENST00000383882 92 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 RNU6-306P-201ENST00000384617 107 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 MIR32-201ENST00000384965 70 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 AL033519.2-201ENST00000403958 392 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.76□□□□□ -1.97
HMGB1P09429 AL357134.1-201ENST00000445848 426 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 AC009237.7-201ENST00000447357 229 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 AC016717.1-201ENST00000448918 286 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.76□□□□□ -1.97
HMGB1P09429 Y_RNA.655-201ENST00000515919 96 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 RNU6-1314P-201ENST00000517139 104 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 MTND1P5-201ENST00000517906 940 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.76□□□□□ -1.97
HMGB1P09429 AC002984.1-201ENST00000591692 448 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 AC116312.1-201ENST00000606841 314 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 AC093913.1-201ENST00000614178 329 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.76□□□□□ -1.97
HMGB1P09429 MTND5P9-201ENST00000503854 1755 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
HMGB1P09429 AL136360.1-201ENST00000503377 1900 ntBASIC2.76□□□□□ -1.97
HMGB1P09429 MTND4P5-201ENST00000435821 1374 ntBASIC2.75□□□□□ -1.97
HMGB1P09429 RNU6-1305P-201ENST00000364353 104 ntBASIC2.75□□□□□ -1.97
HMGB1P09429 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.75□□□□□ -1.97
HMGB1P09429 AC009963.1-201ENST00000417265 157 ntBASIC2.75□□□□□ -1.97
HMGB1P09429 AL358453.1-201ENST00000422522 250 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms