Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL4A2P08572 MIR216A-201ENST00000385063 110 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AL049545.1-201ENST00000401856 572 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A2P08572 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.89□□□□□ -2.27
COL4A2P08572 EBAG9P1-201ENST00000418955 543 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.89□□□□□ -2.27
COL4A2P08572 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A2P08572 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.89□□□□□ -2.27
COL4A2P08572 PRPS1P1-201ENST00000445305 876 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.89□□□□□ -2.27
COL4A2P08572 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A2P08572 AC114801.2-201ENST00000503825 781 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A2P08572 MTND1P22-201ENST00000510572 951 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC005741.1-201ENST00000511094 432 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 HSPE1P4-201ENST00000550617 308 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A2P08572 BNIP3P16-201ENST00000589779 534 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC107304.1-201ENST00000604229 296 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AC092354.1-201ENST00000606057 376 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 AL451064.1-201ENST00000607718 471 ntBASIC0.89□□□□□ -2.27
COL4A2P08572 MIR30A-201ENST00000385092 71 ntBASIC0.88□□□□□ -2.27
COL4A2P08572 RNU2-7P-201ENST00000410794 178 ntBASIC0.88□□□□□ -2.27
COL4A2P08572 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.88□□□□□ -2.27
COL4A2P08572 AL445567.1-201ENST00000439121 144 ntBASIC0.88□□□□□ -2.27
COL4A2P08572 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A2P08572 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.88□□□□□ -2.27
COL4A2P08572 AC092989.1-201ENST00000481235 277 ntBASIC0.88□□□□□ -2.27
COL4A2P08572 HMGN1P13-201ENST00000505795 138 ntBASIC0.88□□□□□ -2.27
COL4A2P08572 MIR3169-201ENST00000578032 83 ntBASIC0.88□□□□□ -2.27
COL4A2P08572 AC064872.1-201ENST00000604823 1072 ntBASIC0.88□□□□□ -2.27
COL4A2P08572 AC006566.1-201ENST00000608943 513 ntBASIC0.88□□□□□ -2.27
COL4A2P08572 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A2P08572 PCGEM1.1-201ENST00000613431 131 ntBASIC0.88□□□□□ -2.27
COL4A2P08572 RNU6-553P-201ENST00000364047 96 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 RNU6-378P-201ENST00000384324 107 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 MIR193B-201ENST00000384907 83 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 MIR597-201ENST00000384968 97 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
COL4A2P08572 RNU2-29P-201ENST00000410423 189 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 RNA5SP100-201ENST00000410903 110 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 RNA5SP59-201ENST00000410922 110 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 AC123900.1-201ENST00000420390 96 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.87□□□□□ -2.27
COL4A2P08572 AL365203.2-201ENST00000423444 196 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
COL4A2P08572 AL669831.1-202ENST00000428504 417 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 GTF2IP13-201ENST00000438487 386 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 AC010409.1-201ENST00000487382 476 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 AC105313.1-201ENST00000509121 353 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 RNU5F-4P-201ENST00000516581 114 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 SNORA18.6-201ENST00000516792 115 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 RNA5SP503-201ENST00000517047 117 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 SNORA25.17-201ENST00000517184 124 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
COL4A2P08572 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.87□□□□□ -2.27
COL4A2P08572 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.87□□□□□ -2.27
COL4A2P08572 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.87□□□□□ -2.27
COL4A2P08572 AC005786.1-201ENST00000588553 154 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 AC004223.4-201ENST00000612426 332 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 AC097372.5-201ENST00000623665 376 ntBASIC0.87□□□□□ -2.27
COL4A2P08572 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
COL4A2P08572 RNU6-715P-201ENST00000365204 103 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNU6-903P-201ENST00000391270 109 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNA5SP201-201ENST00000410316 124 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNU4-46P-201ENST00000410818 138 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNU2-41P-201ENST00000410991 178 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AL133396.1-201ENST00000432048 687 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AL162395.1-201ENST00000457882 422 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNU1-131P-201ENST00000458943 161 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 HAR1A.1-201ENST00000459583 118 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC145146.1-201ENST00000496370 254 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC008628.2-201ENST00000502605 298 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC010486.2-201ENST00000505572 483 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 MTCO3P28-201ENST00000513351 515 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNVU1-2-201ENST00000516326 135 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNA5SP395-201ENST00000516567 118 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC069113.1-201ENST00000517763 267 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A2P08572 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.86□□□□□ -2.27
COL4A2P08572 AL391840.1-201ENST00000571144 367 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 MTATP6P24-201ENST00000576835 677 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC016925.2-201ENST00000605108 242 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC008536.2-201ENST00000607284 349 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AL360219.1-201ENST00000610230 366 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC104073.3-201ENST00000610942 955 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC022513.1-201ENST00000624512 117 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC018630.2-201ENST00000534866 2403 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
COL4A2P08572 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
COL4A2P08572 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
COL4A2P08572 AC092268.1-201ENST00000342691 405 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNU6-1120P-201ENST00000362988 108 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms