Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNU6-552P-201ENST00000362869 119 ntBASIC0.49□□□□□ -2.33
CTSDP07339 MIR605-201ENST00000385078 83 ntBASIC0.49□□□□□ -2.33
CTSDP07339 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CTSDP07339 SNORD12-201ENST00000391002 90 ntBASIC0.49□□□□□ -2.33
CTSDP07339 MIR548J-201ENST00000408833 112 ntBASIC0.49□□□□□ -2.33
CTSDP07339 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.49□□□□□ -2.33
CTSDP07339 AC063976.4-201ENST00000421971 163 ntBASIC0.49□□□□□ -2.33
CTSDP07339 RPL23AP95-201ENST00000426806 265 ntBASIC0.49□□□□□ -2.33
CTSDP07339 USP9YP28-201ENST00000435142 589 ntBASIC0.49□□□□□ -2.33
CTSDP07339 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.49□□□□□ -2.33
CTSDP07339 GAPDHP17-201ENST00000449858 1001 ntBASIC0.49□□□□□ -2.33
CTSDP07339 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.49□□□□□ -2.33
CTSDP07339 C1DP4-201ENST00000455429 424 ntBASIC0.49□□□□□ -2.33
CTSDP07339 HMGN1P12-201ENST00000499125 195 ntBASIC0.49□□□□□ -2.33
CTSDP07339 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.49□□□□□ -2.33
CTSDP07339 HSPE1P23-201ENST00000509838 286 ntBASIC0.49□□□□□ -2.33
CTSDP07339 SUMO2P16-201ENST00000519475 264 ntBASIC0.49□□□□□ -2.33
CTSDP07339 AC023050.3-201ENST00000541142 333 ntBASIC0.49□□□□□ -2.33
CTSDP07339 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.49□□□□□ -2.33
CTSDP07339 MIR4742-201ENST00000581069 85 ntBASIC0.49□□□□□ -2.33
CTSDP07339 Z98751.3-201ENST00000604447 521 ntBASIC0.49□□□□□ -2.33
CTSDP07339 AC064872.1-201ENST00000604823 1072 ntBASIC0.49□□□□□ -2.33
CTSDP07339 AC105129.3-201ENST00000605455 485 ntBASIC0.49□□□□□ -2.33
CTSDP07339 AL139418.1-201ENST00000613613 177 ntBASIC0.49□□□□□ -2.33
CTSDP07339 AC107308.1-201ENST00000615897 301 ntBASIC0.49□□□□□ -2.33
CTSDP07339 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
CTSDP07339 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CTSDP07339 AC027514.1-201ENST00000588561 1603 ntBASIC0.49□□□□□ -2.33
CTSDP07339 AC068700.1-201ENST00000565862 3754 ntBASIC0.48□□□□□ -2.33
CTSDP07339 RNU6-428P-201ENST00000362942 107 ntBASIC0.48□□□□□ -2.33
CTSDP07339 Y_RNA.238-201ENST00000364441 102 ntBASIC0.48□□□□□ -2.33
CTSDP07339 RNU6-418P-201ENST00000384035 107 ntBASIC0.48□□□□□ -2.33
CTSDP07339 RNU6-950P-201ENST00000384651 107 ntBASIC0.48□□□□□ -2.33
CTSDP07339 MIR608-201ENST00000384820 100 ntBASIC0.48□□□□□ -2.33
CTSDP07339 RPL21P1-201ENST00000399532 476 ntBASIC0.48□□□□□ -2.33
CTSDP07339 MIR300-201ENST00000401138 83 ntBASIC0.48□□□□□ -2.33
CTSDP07339 RPS29P13-201ENST00000402041 169 ntBASIC0.48□□□□□ -2.33
CTSDP07339 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.48□□□□□ -2.33
CTSDP07339 SNAP23P1-201ENST00000433229 246 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AC013470.1-201ENST00000453438 462 ntBASIC0.48□□□□□ -2.33
CTSDP07339 SNORA31.2-201ENST00000516019 134 ntBASIC0.48□□□□□ -2.33
CTSDP07339 RNA5SP168-201ENST00000516642 112 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AP003181.2-201ENST00000528941 181 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AP003484.1-201ENST00000530974 250 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AC004812.1-201ENST00000540773 146 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AL137100.2-201ENST00000555786 315 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.48□□□□□ -2.33
CTSDP07339 MIR151B-201ENST00000584249 96 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AC009994.1-201ENST00000606889 253 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AC005520.5-201ENST00000613926 164 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AL607023.1-201ENST00000620045 248 ntBASIC0.48□□□□□ -2.33
CTSDP07339 AL031667.3-201ENST00000620124 655 ntBASIC0.48□□□□□ -2.33
CTSDP07339 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.48□□□□□ -2.33
CTSDP07339 AL445984.1-201ENST00000637834 659 ntBASIC0.48□□□□□ -2.33
CTSDP07339 RNU6-660P-201ENST00000364566 109 ntBASIC0.47□□□□□ -2.33
CTSDP07339 RNU6-116P-201ENST00000384042 109 ntBASIC0.47□□□□□ -2.33
CTSDP07339 Y_RNA.576-201ENST00000384781 102 ntBASIC0.47□□□□□ -2.33
CTSDP07339 MIR200A-201ENST00000384875 90 ntBASIC0.47□□□□□ -2.33
CTSDP07339 RNU6-910P-201ENST00000390844 107 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.47□□□□□ -2.33
CTSDP07339 AC084290.1-201ENST00000434995 374 ntBASIC0.47□□□□□ -2.33
CTSDP07339 EXOSC3P1-201ENST00000448649 500 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.47□□□□□ -2.33
CTSDP07339 AC091435.1-201ENST00000505442 584 ntBASIC0.47□□□□□ -2.33
CTSDP07339 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.47□□□□□ -2.33
CTSDP07339 AC090142.3-201ENST00000519012 385 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AC091489.2-201ENST00000566263 604 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.47□□□□□ -2.33
CTSDP07339 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AC008751.2-201ENST00000597885 980 ntBASIC0.47□□□□□ -2.33
CTSDP07339 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.47□□□□□ -2.33
CTSDP07339 AL078603.1-201ENST00000603824 313 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AC064807.4-201ENST00000607201 407 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AC021506.2-201ENST00000612354 169 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AC104010.1-201ENST00000616889 150 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AL136221.1-201ENST00000621449 509 ntBASIC0.47□□□□□ -2.33
CTSDP07339 AL450472.1-202ENST00000637286 180 ntBASIC0.47□□□□□ -2.33
CTSDP07339 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
CTSDP07339 RNU6-545P-201ENST00000362681 104 ntBASIC0.46□□□□□ -2.34
CTSDP07339 snoU2-30.2-201ENST00000362805 70 ntBASIC0.46□□□□□ -2.34
CTSDP07339 Y_RNA.226-201ENST00000364337 114 ntBASIC0.46□□□□□ -2.34
CTSDP07339 MIR208B-201ENST00000401172 77 ntBASIC0.46□□□□□ -2.34
CTSDP07339 MIR1287-201ENST00000408492 90 ntBASIC0.46□□□□□ -2.34
CTSDP07339 Y_RNA.608-201ENST00000410647 95 ntBASIC0.46□□□□□ -2.34
CTSDP07339 RNU6-1054P-201ENST00000411293 104 ntBASIC0.46□□□□□ -2.34
CTSDP07339 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.46□□□□□ -2.34
CTSDP07339 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.46□□□□□ -2.34
CTSDP07339 AC011233.1-201ENST00000422812 283 ntBASIC0.46□□□□□ -2.34
CTSDP07339 AC002429.1-201ENST00000437672 148 ntBASIC0.46□□□□□ -2.34
CTSDP07339 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.46□□□□□ -2.34
CTSDP07339 AC116562.3-201ENST00000506136 177 ntBASIC0.46□□□□□ -2.34
CTSDP07339 AC068587.5-201ENST00000528506 175 ntBASIC0.46□□□□□ -2.34
CTSDP07339 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.46□□□□□ -2.34
CTSDP07339 AC016727.2-201ENST00000603988 621 ntBASIC0.46□□□□□ -2.34
CTSDP07339 AC009509.4-201ENST00000619202 509 ntBASIC0.46□□□□□ -2.34
CTSDP07339 AC138649.3-201ENST00000622154 254 ntBASIC0.46□□□□□ -2.34
CTSDP07339 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
CTSDP07339 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.45□□□□□ -2.34
CTSDP07339 RNU6-562P-201ENST00000362731 107 ntBASIC0.45□□□□□ -2.34
CTSDP07339 Y_RNA.124-201ENST00000363339 93 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms