Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.56□□□□□ -2.16
P04436 AL035666.1-201ENST00000446195 348 ntBASIC1.56□□□□□ -2.16
P04436 AC008628.2-201ENST00000502605 298 ntBASIC1.56□□□□□ -2.16
P04436 ATP5EP1-201ENST00000510257 156 ntBASIC1.56□□□□□ -2.16
P04436 SNORA19.2-201ENST00000516013 114 ntBASIC1.56□□□□□ -2.16
P04436 RNU6-1281P-201ENST00000516223 105 ntBASIC1.56□□□□□ -2.16
P04436 RNU6-612P-201ENST00000516909 102 ntBASIC1.56□□□□□ -2.16
P04436 AC087854.1-201ENST00000519706 414 ntBASIC1.56□□□□□ -2.16
P04436 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.56□□□□□ -2.16
P04436 AC087441.2-201ENST00000529141 262 ntBASIC1.56□□□□□ -2.16
P04436 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.56□□□□□ -2.16
P04436 AL157687.1-201ENST00000554853 619 ntBASIC1.56□□□□□ -2.16
P04436 AC010525.2-201ENST00000590920 195 ntBASIC1.56□□□□□ -2.16
P04436 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
P04436 CBX3P1-201ENST00000325243 554 ntBASIC1.55□□□□□ -2.16
P04436 AC092268.1-201ENST00000342691 405 ntBASIC1.55□□□□□ -2.16
P04436 SNORD114-6-201ENST00000364393 72 ntBASIC1.55□□□□□ -2.16
P04436 Y_RNA.256-201ENST00000364594 104 ntBASIC1.55□□□□□ -2.16
P04436 Y_RNA.504-201ENST00000384481 104 ntBASIC1.55□□□□□ -2.16
P04436 RNU6-160P-201ENST00000384591 107 ntBASIC1.55□□□□□ -2.16
P04436 SNORA12.2-201ENST00000391040 156 ntBASIC1.55□□□□□ -2.16
P04436 AL357139.1-201ENST00000407792 426 ntBASIC1.55□□□□□ -2.16
P04436 Y_RNA.615-201ENST00000410769 117 ntBASIC1.55□□□□□ -2.16
P04436 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.55□□□□□ -2.16
P04436 AL359672.1-201ENST00000442302 409 ntBASIC1.55□□□□□ -2.16
P04436 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.55□□□□□ -2.16
P04436 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.55□□□□□ -2.16
P04436 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.55□□□□□ -2.16
P04436 AC016632.1-201ENST00000503994 196 ntBASIC1.55□□□□□ -2.16
P04436 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.55□□□□□ -2.16
P04436 AC025465.4-201ENST00000513422 638 ntBASIC1.55□□□□□ -2.16
P04436 Y_RNA.665-201ENST00000516177 98 ntBASIC1.55□□□□□ -2.16
P04436 RNU6-506P-201ENST00000516553 94 ntBASIC1.55□□□□□ -2.16
P04436 RNU2-44P-201ENST00000516795 194 ntBASIC1.55□□□□□ -2.16
P04436 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.55□□□□□ -2.16
P04436 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.55□□□□□ -2.16
P04436 SCOCP1-201ENST00000554676 349 ntBASIC1.55□□□□□ -2.16
P04436 AC245505.1-201ENST00000556398 224 ntBASIC1.55□□□□□ -2.16
P04436 CTHRC1P1-201ENST00000605383 469 ntBASIC1.55□□□□□ -2.16
P04436 AC015540.1-201ENST00000615828 501 ntBASIC1.55□□□□□ -2.16
P04436 MIR1321-201ENST00000637766 79 ntBASIC1.55□□□□□ -2.16
P04436 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
P04436 RNU6-1317P-201ENST00000364582 104 ntBASIC1.54□□□□□ -2.16
P04436 Y_RNA.554-201ENST00000384672 102 ntBASIC1.54□□□□□ -2.16
P04436 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
P04436 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
P04436 EIF4E2P1-201ENST00000393781 255 ntBASIC1.54□□□□□ -2.16
P04436 RNU2-41P-201ENST00000410991 178 ntBASIC1.54□□□□□ -2.16
P04436 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.54□□□□□ -2.16
P04436 RPL31P63-201ENST00000422565 375 ntBASIC1.54□□□□□ -2.16
P04436 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.54□□□□□ -2.16
P04436 ERLEC1P1-201ENST00000433806 578 ntBASIC1.54□□□□□ -2.16
P04436 SEPT14P3-201ENST00000439401 183 ntBASIC1.54□□□□□ -2.16
P04436 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.54□□□□□ -2.16
P04436 AL732372.2-207ENST00000445840 183 ntBASIC1.54□□□□□ -2.16
P04436 HMGN2P18-201ENST00000450680 270 ntBASIC1.54□□□□□ -2.16
P04436 SEPT14P2-201ENST00000453405 183 ntBASIC1.54□□□□□ -2.16
P04436 AMD1P1-201ENST00000457220 922 ntBASIC1.54□□□□□ -2.16
P04436 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
P04436 RNA5SP57-201ENST00000459463 123 ntBASIC1.54□□□□□ -2.16
P04436 RNU7-66P-201ENST00000459469 62 ntBASIC1.54□□□□□ -2.16
P04436 RNU6-1037P-201ENST00000459571 107 ntBASIC1.54□□□□□ -2.16
P04436 HMGN2P26-201ENST00000463169 339 ntBASIC1.54□□□□□ -2.16
P04436 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.54□□□□□ -2.16
P04436 AC021146.2-201ENST00000504736 556 ntBASIC1.54□□□□□ -2.16
P04436 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.54□□□□□ -2.16
P04436 AC008834.1-201ENST00000511612 175 ntBASIC1.54□□□□□ -2.16
P04436 SEPT14P4-201ENST00000513445 186 ntBASIC1.54□□□□□ -2.16
P04436 FO082796.1-201ENST00000523795 183 ntBASIC1.54□□□□□ -2.16
P04436 DEFB131C-201ENST00000528817 165 ntBASIC1.54□□□□□ -2.16
P04436 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.54□□□□□ -2.16
P04436 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.54□□□□□ -2.16
P04436 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
P04436 AC024614.2-201ENST00000577584 372 ntBASIC1.54□□□□□ -2.16
P04436 AL162413.1-201ENST00000603198 110 ntBASIC1.54□□□□□ -2.16
P04436 AC005520.5-201ENST00000613926 164 ntBASIC1.54□□□□□ -2.16
P04436 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.54□□□□□ -2.16
P04436 AC022513.1-201ENST00000624512 117 ntBASIC1.54□□□□□ -2.16
P04436 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
P04436 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
P04436 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.16
P04436 RNU6-23P-201ENST00000363283 107 ntBASIC1.53□□□□□ -2.16
P04436 RNU6-254P-201ENST00000363377 107 ntBASIC1.53□□□□□ -2.16
P04436 RNY3P3-201ENST00000363816 102 ntBASIC1.53□□□□□ -2.16
P04436 RNA5SP493-201ENST00000364115 91 ntBASIC1.53□□□□□ -2.16
P04436 RNU6-234P-201ENST00000365229 104 ntBASIC1.53□□□□□ -2.16
P04436 Y_RNA.332-201ENST00000365271 113 ntBASIC1.53□□□□□ -2.16
P04436 RNU6-26P-201ENST00000383985 107 ntBASIC1.53□□□□□ -2.16
P04436 SNORD116-4-201ENST00000384733 96 ntBASIC1.53□□□□□ -2.16
P04436 RNA5SP213-201ENST00000391031 106 ntBASIC1.53□□□□□ -2.16
P04436 AL030996.1-201ENST00000411430 235 ntBASIC1.53□□□□□ -2.16
P04436 USP9YP28-201ENST00000435142 589 ntBASIC1.53□□□□□ -2.16
P04436 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.53□□□□□ -2.16
P04436 HSPE1P21-201ENST00000438283 308 ntBASIC1.53□□□□□ -2.16
P04436 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.53□□□□□ -2.16
P04436 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.53□□□□□ -2.16
P04436 RNU6-720P-201ENST00000516363 108 ntBASIC1.53□□□□□ -2.16
P04436 CBX3P4-201ENST00000538909 354 ntBASIC1.53□□□□□ -2.16
P04436 TPRKBP2-201ENST00000565969 475 ntBASIC1.53□□□□□ -2.16
P04436 AC109446.1-201ENST00000566172 220 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms