Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-933P-201ENST00000384424 107 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 Y_RNA.529-201ENST00000384586 119 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 SNORA26.3-201ENST00000391119 136 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 RNU4-53P-201ENST00000410828 140 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 RNU6-1304P-201ENST00000411374 106 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 RPL37P10-201ENST00000412884 288 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 AL590135.1-201ENST00000422215 156 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 AC019205.3-201ENST00000424573 156 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 AC078809.1-201ENST00000427601 140 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 AC016700.2-201ENST00000446011 156 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 AC079354.2-201ENST00000453523 154 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 SNORD5.1-201ENST00000458800 75 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 AC015911.1-201ENST00000495111 156 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.93□□□□□ -2.1
MT-ND1P03886 Y_RNA.670-201ENST00000516255 105 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 RNU6-667P-201ENST00000517186 102 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.93□□□□□ -2.1
MT-ND1P03886 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.93□□□□□ -2.1
MT-ND1P03886 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.93□□□□□ -2.1
MT-ND1P03886 AC011494.1-201ENST00000596454 237 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.93□□□□□ -2.1
MT-ND1P03886 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 SNORD98-201ENST00000636377 67 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 ZNF658B-202ENST00000615961 3375 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 MTND5P6-201ENST00000422338 1798 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MT-ND1P03886 RNU6-1274P-201ENST00000384557 107 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
MT-ND1P03886 SNORA46.1-201ENST00000391069 153 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 Y_RNA.604-201ENST00000410574 102 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.92□□□□□ -2.1
MT-ND1P03886 AC027124.2-201ENST00000428249 105 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 DAP3P1-201ENST00000441522 278 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.92□□□□□ -2.1
MT-ND1P03886 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.92□□□□□ -2.1
MT-ND1P03886 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.92□□□□□ -2.1
MT-ND1P03886 AC104564.1-201ENST00000493028 407 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.92□□□□□ -2.1
MT-ND1P03886 RNU6-1213P-201ENST00000517075 94 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 RNU1-54P-201ENST00000517181 120 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.92□□□□□ -2.1
MT-ND1P03886 AC115990.1-201ENST00000526957 301 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 AC018462.2-201ENST00000605375 395 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 LARP7P1-201ENST00000605576 316 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.92□□□□□ -2.1
MT-ND1P03886 AC063943.3-201ENST00000615562 356 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 AC112487.2-201ENST00000637950 304 ntBASIC1.92□□□□□ -2.1
MT-ND1P03886 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
MT-ND1P03886 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
MT-ND1P03886 AP000560.1-201ENST00000624150 1937 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
MT-ND1P03886 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
MT-ND1P03886 ZNF702P-202ENST00000434269 1966 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.91□□□□□ -2.1
MT-ND1P03886 Y_RNA.48-201ENST00000362710 103 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 RNU6-944P-201ENST00000364023 107 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 Y_RNA.263-201ENST00000364659 114 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 Y_RNA.404-201ENST00000383978 102 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 SNORA29-201ENST00000384183 140 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 Y_RNA.482-201ENST00000384377 111 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 Y_RNA.510-201ENST00000384511 114 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 RNU6-601P-201ENST00000384540 107 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 MIR518A2-201ENST00000384966 87 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 MIR29B2-201ENST00000385055 81 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
MT-ND1P03886 RNU6-1009P-201ENST00000390996 107 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 Y_RNA.594-201ENST00000410373 140 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 RNU6-1050P-201ENST00000410388 107 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 RNU6-174P-201ENST00000410406 106 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 RNU2-32P-201ENST00000411193 191 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AL139156.1-201ENST00000412785 841 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.91□□□□□ -2.1
MT-ND1P03886 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND1P03886 SNRPEP8-201ENST00000442866 260 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND1P03886 AC114801.2-201ENST00000503825 781 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AC016632.1-201ENST00000503994 196 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 FGF7P4-201ENST00000509595 295 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND1P03886 RNU6-1016P-201ENST00000516689 94 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AC007375.1-201ENST00000554513 578 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.91□□□□□ -2.1
MT-ND1P03886 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND1P03886 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND1P03886 AL158827.2-201ENST00000602494 330 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AL034555.1-201ENST00000604816 211 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AC018889.1-201ENST00000605372 397 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AC009318.2-201ENST00000610917 651 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 Y_RNA.804-201ENST00000615262 101 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 AL691447.3-201ENST00000635020 330 ntBASIC1.91□□□□□ -2.1
MT-ND1P03886 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
MT-ND1P03886 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
MT-ND1P03886 AC092268.1-201ENST00000342691 405 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
MT-ND1P03886 RNU5B-2P-201ENST00000363036 113 ntBASIC1.9□□□□□ -2.11
MT-ND1P03886 RNU5E-4P-201ENST00000364931 120 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 222.9 ms