Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 GAPDHP17-201ENST00000449858 1001 ntBASIC0.62□□□□□ -2.31
APOEP02649 USP9YP25-201ENST00000457708 443 ntBASIC0.62□□□□□ -2.31
APOEP02649 RPS23P5-201ENST00000495419 428 ntBASIC0.62□□□□□ -2.31
APOEP02649 SNORA31.4-201ENST00000516049 129 ntBASIC0.62□□□□□ -2.31
APOEP02649 Y_RNA.673-201ENST00000516306 88 ntBASIC0.62□□□□□ -2.31
APOEP02649 AP003181.2-201ENST00000528941 181 ntBASIC0.62□□□□□ -2.31
APOEP02649 AC090517.1-201ENST00000569307 266 ntBASIC0.62□□□□□ -2.31
APOEP02649 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.62□□□□□ -2.31
APOEP02649 BNIP3P16-201ENST00000589779 534 ntBASIC0.62□□□□□ -2.31
APOEP02649 AL929325.1-201ENST00000603096 117 ntBASIC0.62□□□□□ -2.31
APOEP02649 AC021506.2-201ENST00000612354 169 ntBASIC0.62□□□□□ -2.31
APOEP02649 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.62□□□□□ -2.31
APOEP02649 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
APOEP02649 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
APOEP02649 U3.4-201ENST00000363352 213 ntBASIC0.61□□□□□ -2.31
APOEP02649 RPS3AP1-201ENST00000413190 320 ntBASIC0.61□□□□□ -2.31
APOEP02649 USP9YP28-201ENST00000435142 589 ntBASIC0.61□□□□□ -2.31
APOEP02649 RPS24P1-201ENST00000438550 371 ntBASIC0.61□□□□□ -2.31
APOEP02649 AL133217.1-201ENST00000450980 425 ntBASIC0.61□□□□□ -2.31
APOEP02649 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.61□□□□□ -2.31
APOEP02649 AC067942.3-201ENST00000512025 362 ntBASIC0.61□□□□□ -2.31
APOEP02649 RNU6-685P-201ENST00000517088 95 ntBASIC0.61□□□□□ -2.31
APOEP02649 AC105185.1-201ENST00000518705 535 ntBASIC0.61□□□□□ -2.31
APOEP02649 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.61□□□□□ -2.31
APOEP02649 MTND4LP18-201ENST00000526864 291 ntBASIC0.61□□□□□ -2.31
APOEP02649 AL590705.4-201ENST00000532209 134 ntBASIC0.61□□□□□ -2.31
APOEP02649 AL121579.1-201ENST00000555129 305 ntBASIC0.61□□□□□ -2.31
APOEP02649 MIR5695-201ENST00000579717 85 ntBASIC0.61□□□□□ -2.31
APOEP02649 AC008751.2-201ENST00000597885 980 ntBASIC0.61□□□□□ -2.31
APOEP02649 AC105148.1-201ENST00000604961 409 ntBASIC0.61□□□□□ -2.31
APOEP02649 AC022709.1-201ENST00000615967 87 ntBASIC0.61□□□□□ -2.31
APOEP02649 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.61□□□□□ -2.31
APOEP02649 AL450472.1-202ENST00000637286 180 ntBASIC0.61□□□□□ -2.31
APOEP02649 BX322639.1-202ENST00000423987 2213 ntBASIC0.61□□□□□ -2.31
APOEP02649 Y_RNA.22-201ENST00000362492 102 ntBASIC0.6□□□□□ -2.31
APOEP02649 RNU6-552P-201ENST00000362869 119 ntBASIC0.6□□□□□ -2.31
APOEP02649 RNU4-92P-201ENST00000363783 136 ntBASIC0.6□□□□□ -2.31
APOEP02649 RNU1-133P-201ENST00000364867 167 ntBASIC0.6□□□□□ -2.31
APOEP02649 Y_RNA.324-201ENST00000365165 102 ntBASIC0.6□□□□□ -2.31
APOEP02649 Y_RNA.363-201ENST00000365529 113 ntBASIC0.6□□□□□ -2.31
APOEP02649 Y_RNA.508-201ENST00000384502 114 ntBASIC0.6□□□□□ -2.31
APOEP02649 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
APOEP02649 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
APOEP02649 RNA5SP109-201ENST00000391010 116 ntBASIC0.6□□□□□ -2.31
APOEP02649 SNORA26.3-201ENST00000391119 136 ntBASIC0.6□□□□□ -2.31
APOEP02649 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.6□□□□□ -2.31
APOEP02649 AC137499.1-201ENST00000427602 88 ntBASIC0.6□□□□□ -2.31
APOEP02649 MED13P1-201ENST00000428342 171 ntBASIC0.6□□□□□ -2.31
APOEP02649 AC073614.1-201ENST00000438690 650 ntBASIC0.6□□□□□ -2.31
APOEP02649 snoU13.18-201ENST00000459483 104 ntBASIC0.6□□□□□ -2.31
APOEP02649 AC092991.1-201ENST00000477176 376 ntBASIC0.6□□□□□ -2.31
APOEP02649 AC025423.5-201ENST00000550230 219 ntBASIC0.6□□□□□ -2.31
APOEP02649 Z98751.3-201ENST00000604447 521 ntBASIC0.6□□□□□ -2.31
APOEP02649 AC064872.1-201ENST00000604823 1072 ntBASIC0.6□□□□□ -2.31
APOEP02649 AC009509.4-201ENST00000619202 509 ntBASIC0.6□□□□□ -2.31
APOEP02649 AC023934.1-201ENST00000574529 2389 ntBASIC0.6□□□□□ -2.31
APOEP02649 AL442644.1-201ENST00000454390 3105 ntBASIC0.6□□□□□ -2.31
APOEP02649 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
APOEP02649 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
APOEP02649 RNA5SP361-201ENST00000362686 118 ntBASIC0.59□□□□□ -2.31
APOEP02649 RNU6-931P-201ENST00000363850 107 ntBASIC0.59□□□□□ -2.31
APOEP02649 Y_RNA.355-201ENST00000365462 98 ntBASIC0.59□□□□□ -2.31
APOEP02649 SNORA36A-201ENST00000384221 132 ntBASIC0.59□□□□□ -2.31
APOEP02649 RNU6-45P-201ENST00000384471 107 ntBASIC0.59□□□□□ -2.31
APOEP02649 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
APOEP02649 AC010154.1-201ENST00000425857 269 ntBASIC0.59□□□□□ -2.31
APOEP02649 HSFY7P-201ENST00000432672 318 ntBASIC0.59□□□□□ -2.31
APOEP02649 HSFY8P-201ENST00000437934 318 ntBASIC0.59□□□□□ -2.31
APOEP02649 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.59□□□□□ -2.31
APOEP02649 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.59□□□□□ -2.31
APOEP02649 RAP1BP2-201ENST00000478270 544 ntBASIC0.59□□□□□ -2.31
APOEP02649 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.59□□□□□ -2.31
APOEP02649 SNORD79.1-201ENST00000516069 84 ntBASIC0.59□□□□□ -2.31
APOEP02649 RNU6-922P-201ENST00000516753 99 ntBASIC0.59□□□□□ -2.31
APOEP02649 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
APOEP02649 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.59□□□□□ -2.31
APOEP02649 TMF1P1-201ENST00000576058 373 ntBASIC0.59□□□□□ -2.31
APOEP02649 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.59□□□□□ -2.31
APOEP02649 AC069431.2-201ENST00000604149 1099 ntBASIC0.59□□□□□ -2.31
APOEP02649 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.59□□□□□ -2.32
APOEP02649 AC068700.1-201ENST00000565862 3754 ntBASIC0.59□□□□□ -2.32
APOEP02649 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
APOEP02649 Y_RNA.796-201ENST00000364268 102 ntBASIC0.58□□□□□ -2.32
APOEP02649 RNU6-660P-201ENST00000364566 109 ntBASIC0.58□□□□□ -2.32
APOEP02649 Y_RNA.799-201ENST00000364992 102 ntBASIC0.58□□□□□ -2.32
APOEP02649 RNU6-116P-201ENST00000384042 109 ntBASIC0.58□□□□□ -2.32
APOEP02649 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.58□□□□□ -2.32
APOEP02649 AC091874.1-201ENST00000511402 339 ntBASIC0.58□□□□□ -2.32
APOEP02649 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
APOEP02649 AL607023.1-201ENST00000620045 248 ntBASIC0.58□□□□□ -2.32
APOEP02649 AC092268.1-201ENST00000342691 405 ntBASIC0.57□□□□□ -2.32
APOEP02649 RNU6-1303P-201ENST00000364841 107 ntBASIC0.57□□□□□ -2.32
APOEP02649 SNORA72.2-201ENST00000365028 127 ntBASIC0.57□□□□□ -2.32
APOEP02649 Y_RNA.354-201ENST00000365448 111 ntBASIC0.57□□□□□ -2.32
APOEP02649 RNU6-533P-201ENST00000384144 107 ntBASIC0.57□□□□□ -2.32
APOEP02649 Y_RNA.576-201ENST00000384781 102 ntBASIC0.57□□□□□ -2.32
APOEP02649 SNORD12-201ENST00000391002 90 ntBASIC0.57□□□□□ -2.32
APOEP02649 SNORD115.1-201ENST00000391109 76 ntBASIC0.57□□□□□ -2.32
APOEP02649 RNU6-1054P-201ENST00000411293 104 ntBASIC0.57□□□□□ -2.32
APOEP02649 ELOCP4-201ENST00000420090 333 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms