Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-223P-201ENST00000362830 107 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 RNA5SP264-201ENST00000363115 107 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 RNU6-819P-201ENST00000364116 107 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 RNU6-163P-201ENST00000384396 106 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 RNU6-114P-201ENST00000384704 105 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 MIR573-201ENST00000384964 99 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 GTF2IP3-201ENST00000433887 494 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.19□□□□□ -2.44
SPTA1P02549 STAG3L5P-204ENST00000443759 179 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 MTCO2P7-201ENST00000446518 666 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.19□□□□□ -2.44
SPTA1P02549 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 SNORA25.12-201ENST00000516202 82 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AC011979.2-201ENST00000527568 352 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AC090049.2-201ENST00000550377 109 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 TMF1P1-201ENST00000576058 373 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 MIR4742-201ENST00000581069 85 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.2□□□□□ -2.44
SPTA1P02549 SNORD116-13-201ENST00000384408 92 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 MIR7-1-201ENST00000384871 110 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 SNORA75.6-201ENST00000391318 127 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 CBX3P9-201ENST00000402326 552 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.2□□□□□ -2.44
SPTA1P02549 AC096531.1-201ENST00000419107 107 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 AC013262.1-201ENST00000426710 252 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 AC005094.1-201ENST00000440420 368 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.2□□□□□ -2.44
SPTA1P02549 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.2□□□□□ -2.44
SPTA1P02549 AC245047.8-201ENST00000456455 284 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 RNU7-159P-201ENST00000459284 62 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 AC026410.2-201ENST00000460281 156 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 AC104982.1-201ENST00000478775 574 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.2□□□□□ -2.44
SPTA1P02549 AC023824.3-201ENST00000569003 562 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 VN1R88P-201ENST00000596787 292 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.2□□□□□ -2.44
SPTA1P02549 SGO1P1-201ENST00000603525 1447 ntBASIC-0.2□□□□□ -2.44
SPTA1P02549 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.2□□□□□ -2.44
SPTA1P02549 RNU6-925P-201ENST00000384629 104 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 RNA5SP504-201ENST00000410676 117 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 SNORD71-201ENST00000411292 86 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 LARP1BP3-201ENST00000437229 869 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 AC130509.1-201ENST00000464158 433 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.21□□□□□ -2.44
SPTA1P02549 AC093648.1-201ENST00000623546 606 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.21□□□□□ -2.44
SPTA1P02549 SNORD114-19-201ENST00000363072 75 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 SNORA36.1-201ENST00000363424 132 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 RNU6-673P-201ENST00000365084 104 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.21□□□□□ -2.44
SPTA1P02549 RPL39P39-201ENST00000455840 151 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 snoU13.14-201ENST00000459372 104 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 MTCO1P31-201ENST00000506355 492 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 MTND5P13-201ENST00000513046 1079 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.21□□□□□ -2.44
SPTA1P02549 RN7SKP12-201ENST00000516275 143 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.21□□□□□ -2.44
SPTA1P02549 AF235103.2-201ENST00000525753 346 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 SUB1P2-201ENST00000556401 297 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.21□□□□□ -2.44
SPTA1P02549 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.21□□□□□ -2.44
SPTA1P02549 AC109446.1-201ENST00000566172 220 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 AC133794.1-201ENST00000602731 914 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 AC104073.3-201ENST00000610942 955 ntBASIC-0.21□□□□□ -2.44
SPTA1P02549 MIR340-201ENST00000362125 95 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 SNORA80D-201ENST00000384488 135 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 FCF1P10-201ENST00000407590 479 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 SEPT7P5-201ENST00000434048 306 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 SEPT7P4-201ENST00000437076 306 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.22□□□□□ -2.44
SPTA1P02549 MTCO3P10-201ENST00000455912 772 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 snoU13.30-201ENST00000458951 104 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 RPF2P2-201ENST00000504693 896 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC091860.1-201ENST00000505723 432 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.22□□□□□ -2.44
SPTA1P02549 MTND1P22-201ENST00000510572 951 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.22□□□□□ -2.44
SPTA1P02549 AC093012.1-202ENST00000549403 582 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC080078.2-201ENST00000603766 501 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.22□□□□□ -2.44
SPTA1P02549 MIR8064-201ENST00000612863 90 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AL031667.3-201ENST00000620124 655 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC093875.1-201ENST00000623688 504 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 RNU6-369P-201ENST00000362515 102 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 RNU6-743P-201ENST00000364151 106 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 RNU6-701P-201ENST00000384059 107 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 MIR610-201ENST00000385139 96 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 MT-TQ-201ENST00000387372 72 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 SNORA12.2-201ENST00000391040 156 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 RNU6-952P-201ENST00000391164 108 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC006366.1-201ENST00000422002 759 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AL356583.2-201ENST00000426536 280 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.22□□□□□ -2.44
SPTA1P02549 MTATP6P23-201ENST00000440153 476 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.22□□□□□ -2.44
SPTA1P02549 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms