Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AC136475.10-201ENST00000620253 385 ntBASIC0.65□□□□□ -2.31
HLA-DRAP01903 AL136221.1-201ENST00000621449 509 ntBASIC0.65□□□□□ -2.31
HLA-DRAP01903 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HLA-DRAP01903 RNU6-552P-201ENST00000362869 119 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 SNORD32A-201ENST00000364805 84 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 RNU6-336P-201ENST00000364891 107 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 MIR300-201ENST00000401138 83 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 AC060773.1-201ENST00000421698 310 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 AC007283.2-201ENST00000424739 197 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 GTF2IP13-201ENST00000438487 386 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 GAPDHP17-201ENST00000449858 1001 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 HMGN1P12-201ENST00000499125 195 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 RNU6-165P-201ENST00000517170 99 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.64□□□□□ -2.31
HLA-DRAP01903 AC090888.2-201ENST00000559765 1144 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 AC008751.2-201ENST00000597885 980 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 AC078795.3-201ENST00000602913 472 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 AC064807.4-201ENST00000607201 407 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 AL031667.3-201ENST00000620124 655 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 MIR338-201ENST00000636369 67 ntBASIC0.64□□□□□ -2.31
HLA-DRAP01903 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HLA-DRAP01903 RNY1P12-201ENST00000364251 105 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 SNORD12-201ENST00000391002 90 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
HLA-DRAP01903 RPL23AP95-201ENST00000426806 265 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 RAB28P5-201ENST00000427490 651 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AC084290.1-201ENST00000434995 374 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 USP9YP28-201ENST00000435142 589 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DRAP01903 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DRAP01903 EXOSC3P1-201ENST00000448649 500 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.63□□□□□ -2.31
HLA-DRAP01903 snoU109.3-201ENST00000459477 145 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 PDCD5P2-201ENST00000507570 312 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AP003484.1-201ENST00000530974 250 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AC009994.1-201ENST00000606889 253 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AC018645.2-201ENST00000609151 472 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AC005520.5-201ENST00000613926 164 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AL607023.1-201ENST00000620045 248 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AC138649.3-201ENST00000622154 254 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AL359697.1-201ENST00000624879 587 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 AL445984.1-201ENST00000637834 659 ntBASIC0.63□□□□□ -2.31
HLA-DRAP01903 BX322639.1-202ENST00000423987 2213 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
HLA-DRAP01903 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HLA-DRAP01903 Y_RNA.22-201ENST00000362492 102 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 RNU4-79P-201ENST00000362764 141 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 MIR200A-201ENST00000384875 90 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 RPS29P13-201ENST00000402041 169 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.62□□□□□ -2.31
HLA-DRAP01903 AC063976.4-201ENST00000421971 163 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 AC013470.1-201ENST00000453438 462 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 MTCYBP1-201ENST00000454315 1119 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.62□□□□□ -2.31
HLA-DRAP01903 RNU6-1146P-201ENST00000516282 102 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 RNA5SP220-201ENST00000516298 104 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 SUMO2P16-201ENST00000519475 264 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 AC091489.2-201ENST00000566263 604 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 Z98751.3-201ENST00000604447 521 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 Z99289.3-201ENST00000605586 594 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 AL139418.1-201ENST00000613613 177 ntBASIC0.62□□□□□ -2.31
HLA-DRAP01903 AC068700.1-201ENST00000565862 3754 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 RNU6-428P-201ENST00000362942 107 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 RNU6-660P-201ENST00000364566 109 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 RNU6-418P-201ENST00000384035 107 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 RNU6-116P-201ENST00000384042 109 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 Y_RNA.576-201ENST00000384781 102 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 RNU6-910P-201ENST00000390844 107 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 SNORA40.4-201ENST00000390971 128 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 RNU6-1242P-201ENST00000391052 103 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
HLA-DRAP01903 MIR208B-201ENST00000401172 77 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 SNAP23P1-201ENST00000433229 246 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 RAP1BP2-201ENST00000478270 544 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.61□□□□□ -2.31
HLA-DRAP01903 AC116562.3-201ENST00000506136 177 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.61□□□□□ -2.31
HLA-DRAP01903 SNORA31.2-201ENST00000516019 134 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 AC068587.5-201ENST00000528506 175 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 AP003181.2-201ENST00000528941 181 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 AC025423.5-201ENST00000550230 219 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.61□□□□□ -2.31
HLA-DRAP01903 MIR5000-201ENST00000577717 103 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.61□□□□□ -2.31
HLA-DRAP01903 MIR4753-201ENST00000585119 83 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 AC105129.3-201ENST00000605455 485 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 AC008250.2-201ENST00000615261 205 ntBASIC0.61□□□□□ -2.31
HLA-DRAP01903 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
HLA-DRAP01903 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HLA-DRAP01903 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
HLA-DRAP01903 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.6□□□□□ -2.31
HLA-DRAP01903 Y_RNA.608-201ENST00000410647 95 ntBASIC0.6□□□□□ -2.31
HLA-DRAP01903 C1DP4-201ENST00000455429 424 ntBASIC0.6□□□□□ -2.31
HLA-DRAP01903 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.6□□□□□ -2.31
HLA-DRAP01903 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.6□□□□□ -2.31
HLA-DRAP01903 RNU6-1223P-201ENST00000517124 104 ntBASIC0.6□□□□□ -2.31
HLA-DRAP01903 AC090142.3-201ENST00000519012 385 ntBASIC0.6□□□□□ -2.31
HLA-DRAP01903 AC024995.1-201ENST00000523014 93 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 302.1 ms