Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LDLRP01130 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.51□□□□□ -2.01
LDLRP01130 Y_RNA.2-201ENST00000362330 96 ntBASIC2.51□□□□□ -2.01
LDLRP01130 RNU6-336P-201ENST00000364891 107 ntBASIC2.51□□□□□ -2.01
LDLRP01130 RNU6-843P-201ENST00000384454 104 ntBASIC2.51□□□□□ -2.01
LDLRP01130 SNORA41-201ENST00000384675 132 ntBASIC2.51□□□□□ -2.01
LDLRP01130 RNU6-823P-201ENST00000391042 103 ntBASIC2.51□□□□□ -2.01
LDLRP01130 RNU6-1109P-201ENST00000391187 107 ntBASIC2.51□□□□□ -2.01
LDLRP01130 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LDLRP01130 AL138827.1-201ENST00000402666 306 ntBASIC2.51□□□□□ -2.01
LDLRP01130 RNU6-293P-201ENST00000411259 106 ntBASIC2.51□□□□□ -2.01
LDLRP01130 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LDLRP01130 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.51□□□□□ -2.01
LDLRP01130 AL445687.1-201ENST00000439946 251 ntBASIC2.51□□□□□ -2.01
LDLRP01130 AC112771.1-201ENST00000463581 102 ntBASIC2.51□□□□□ -2.01
LDLRP01130 AC015911.1-201ENST00000495111 156 ntBASIC2.51□□□□□ -2.01
LDLRP01130 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.51□□□□□ -2.01
LDLRP01130 RNU6-635P-201ENST00000516651 102 ntBASIC2.51□□□□□ -2.01
LDLRP01130 SNORD116.3-201ENST00000517176 78 ntBASIC2.51□□□□□ -2.01
LDLRP01130 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.51□□□□□ -2.01
LDLRP01130 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.51□□□□□ -2.01
LDLRP01130 MIR3117-201ENST00000584034 78 ntBASIC2.51□□□□□ -2.01
LDLRP01130 PRR13P7-201ENST00000605538 430 ntBASIC2.51□□□□□ -2.01
LDLRP01130 AL442067.1-201ENST00000613261 223 ntBASIC2.51□□□□□ -2.01
LDLRP01130 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.51□□□□□ -2.01
LDLRP01130 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.51□□□□□ -2.01
LDLRP01130 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
LDLRP01130 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.5□□□□□ -2.01
LDLRP01130 ZNF658B-202ENST00000615961 3375 ntBASIC2.5□□□□□ -2.01
LDLRP01130 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LDLRP01130 RNU6-238P-201ENST00000363313 106 ntBASIC2.5□□□□□ -2.01
LDLRP01130 RNU6-105P-201ENST00000363909 104 ntBASIC2.5□□□□□ -2.01
LDLRP01130 Y_RNA.188-201ENST00000363952 111 ntBASIC2.5□□□□□ -2.01
LDLRP01130 SNORA68.1-201ENST00000364537 132 ntBASIC2.5□□□□□ -2.01
LDLRP01130 Y_RNA.428-201ENST00000384078 102 ntBASIC2.5□□□□□ -2.01
LDLRP01130 MIR517A-201ENST00000385001 87 ntBASIC2.5□□□□□ -2.01
LDLRP01130 SNORA3.2-201ENST00000408221 125 ntBASIC2.5□□□□□ -2.01
LDLRP01130 RNU2-23P-201ENST00000410545 195 ntBASIC2.5□□□□□ -2.01
LDLRP01130 AC138623.1-201ENST00000418060 216 ntBASIC2.5□□□□□ -2.01
LDLRP01130 UBE2V1P4-201ENST00000425374 344 ntBASIC2.5□□□□□ -2.01
LDLRP01130 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.5□□□□□ -2.01
LDLRP01130 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.5□□□□□ -2.01
LDLRP01130 AC112220.1-201ENST00000434628 355 ntBASIC2.5□□□□□ -2.01
LDLRP01130 AL353752.1-201ENST00000454946 260 ntBASIC2.5□□□□□ -2.01
LDLRP01130 Y_RNA.668-201ENST00000516233 93 ntBASIC2.5□□□□□ -2.01
LDLRP01130 RNU5B-3P-201ENST00000516601 115 ntBASIC2.5□□□□□ -2.01
LDLRP01130 RNU6-1271P-201ENST00000517049 105 ntBASIC2.5□□□□□ -2.01
LDLRP01130 Y_RNA.721-201ENST00000517207 102 ntBASIC2.5□□□□□ -2.01
LDLRP01130 GNAI2P1-201ENST00000541815 315 ntBASIC2.5□□□□□ -2.01
LDLRP01130 MIR4635-201ENST00000583759 79 ntBASIC2.5□□□□□ -2.01
LDLRP01130 MIR4765-201ENST00000585007 77 ntBASIC2.5□□□□□ -2.01
LDLRP01130 uc_338.14-201ENST00000613162 166 ntBASIC2.5□□□□□ -2.01
LDLRP01130 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LDLRP01130 Y_RNA.106-201ENST00000363189 100 ntBASIC2.49□□□□□ -2.01
LDLRP01130 RNU1-112P-201ENST00000364401 164 ntBASIC2.49□□□□□ -2.01
LDLRP01130 RNU6-1083P-201ENST00000384022 107 ntBASIC2.49□□□□□ -2.01
LDLRP01130 RNU6-1026P-201ENST00000384465 108 ntBASIC2.49□□□□□ -2.01
LDLRP01130 RNA5SP21-201ENST00000410917 96 ntBASIC2.49□□□□□ -2.01
LDLRP01130 RNU6-1328P-201ENST00000410938 106 ntBASIC2.49□□□□□ -2.01
LDLRP01130 Y_RNA.618-201ENST00000410949 107 ntBASIC2.49□□□□□ -2.01
LDLRP01130 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.49□□□□□ -2.01
LDLRP01130 DPH3P2-201ENST00000422618 250 ntBASIC2.49□□□□□ -2.01
LDLRP01130 BX276092.3-201ENST00000424182 230 ntBASIC2.49□□□□□ -2.01
LDLRP01130 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
LDLRP01130 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.49□□□□□ -2.01
LDLRP01130 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.49□□□□□ -2.01
LDLRP01130 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.49□□□□□ -2.01
LDLRP01130 AC011816.1-201ENST00000441346 546 ntBASIC2.49□□□□□ -2.01
LDLRP01130 AC112492.4-201ENST00000456549 352 ntBASIC2.49□□□□□ -2.01
LDLRP01130 snoU13.23-201ENST00000458863 104 ntBASIC2.49□□□□□ -2.01
LDLRP01130 AC133134.1-201ENST00000466800 359 ntBASIC2.49□□□□□ -2.01
LDLRP01130 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.49□□□□□ -2.01
LDLRP01130 RPL30P12-201ENST00000474666 353 ntBASIC2.49□□□□□ -2.01
LDLRP01130 RPL36AP48-201ENST00000485521 314 ntBASIC2.49□□□□□ -2.01
LDLRP01130 AP001025.1-201ENST00000486139 332 ntBASIC2.49□□□□□ -2.01
LDLRP01130 AC068781.1-201ENST00000488231 618 ntBASIC2.49□□□□□ -2.01
LDLRP01130 RNA5SP148-201ENST00000516527 94 ntBASIC2.49□□□□□ -2.01
LDLRP01130 AC023442.1-201ENST00000531247 422 ntBASIC2.49□□□□□ -2.01
LDLRP01130 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.49□□□□□ -2.01
LDLRP01130 SUB1P3-201ENST00000564581 315 ntBASIC2.49□□□□□ -2.01
LDLRP01130 MIR5092-201ENST00000583139 88 ntBASIC2.49□□□□□ -2.01
LDLRP01130 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.49□□□□□ -2.01
LDLRP01130 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.49□□□□□ -2.01
LDLRP01130 AL606534.2-204ENST00000635008 178 ntBASIC2.49□□□□□ -2.01
LDLRP01130 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LDLRP01130 AL109809.4-201ENST00000603520 2185 ntBASIC2.49□□□□□ -2.01
LDLRP01130 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
LDLRP01130 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
LDLRP01130 RNU6-379P-201ENST00000363813 104 ntBASIC2.48□□□□□ -2.01
LDLRP01130 Y_RNA.389-201ENST00000383924 113 ntBASIC2.48□□□□□ -2.01
LDLRP01130 MIR218-1-201ENST00000384999 110 ntBASIC2.48□□□□□ -2.01
LDLRP01130 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LDLRP01130 RNU6-174P-201ENST00000410406 106 ntBASIC2.48□□□□□ -2.01
LDLRP01130 RN7SKP192-201ENST00000411291 327 ntBASIC2.48□□□□□ -2.01
LDLRP01130 AL133396.1-201ENST00000432048 687 ntBASIC2.48□□□□□ -2.01
LDLRP01130 RPS15AP10-201ENST00000432472 382 ntBASIC2.48□□□□□ -2.01
LDLRP01130 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.48□□□□□ -2.01
LDLRP01130 AC013470.1-201ENST00000453438 462 ntBASIC2.48□□□□□ -2.01
LDLRP01130 SNRPGP7-201ENST00000469016 106 ntBASIC2.48□□□□□ -2.01
LDLRP01130 AC022447.4-201ENST00000504053 364 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms