Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PDGFBP01127 MIRLET7G-201ENST00000362280 84 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 Y_RNA.86-201ENST00000363020 111 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 RNU6-254P-201ENST00000363377 107 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 MIR521-1-201ENST00000384902 87 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 MIR1277-201ENST00000408536 78 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 VN1R36P-201ENST00000414936 291 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 RPS15AP10-201ENST00000432472 382 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 RPL23AP3-201ENST00000453844 468 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.99□□□□□ -2.09
PDGFBP01127 AC079804.2-201ENST00000490376 200 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.99□□□□□ -2.09
PDGFBP01127 AC243960.4-201ENST00000600532 288 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 FAM157A-202ENST00000615155 405 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 U6atac.1-201ENST00000616025 117 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 AC245060.5-201ENST00000610778 3293 ntBASIC1.99□□□□□ -2.09
PDGFBP01127 WWP1P1-201ENST00000466609 2769 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 MTND4P5-201ENST00000435821 1374 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 KPNA2P1-201ENST00000458289 1591 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PDGFBP01127 Y_RNA.100-201ENST00000363141 102 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 RNU6-1329P-201ENST00000365664 107 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 SNORA36A-201ENST00000384221 132 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 SNORD14D-201ENST00000384390 87 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 RNU6-790P-201ENST00000384479 105 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PDGFBP01127 AL033519.2-201ENST00000403958 392 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 RNU2-48P-201ENST00000410694 191 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AL590135.1-201ENST00000422215 156 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AC096920.1-201ENST00000423991 241 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AC019205.3-201ENST00000424573 156 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AC092473.1-201ENST00000441098 221 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AL359672.1-201ENST00000442302 409 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AC016700.2-201ENST00000446011 156 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 PRELID3BP1-201ENST00000457142 540 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 RNU6-1037P-201ENST00000459571 107 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AC015911.1-201ENST00000495111 156 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 RNU5F-2P-201ENST00000516066 82 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 RNU6-612P-201ENST00000516909 102 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AP003033.1-201ENST00000527244 415 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.98□□□□□ -2.09
PDGFBP01127 TRAV32-201ENST00000553993 340 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.98□□□□□ -2.09
PDGFBP01127 MIR3942-201ENST00000585264 109 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AC092794.1-201ENST00000612734 582 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AL132822.1-201ENST00000617063 513 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AC084768.2-201ENST00000622736 221 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 AC009541.1-201ENST00000438279 2662 ntBASIC1.98□□□□□ -2.09
PDGFBP01127 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PDGFBP01127 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
PDGFBP01127 AC009487.4-201ENST00000624969 3585 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PDGFBP01127 Y_RNA.151-201ENST00000363566 112 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 Y_RNA.505-201ENST00000384489 102 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 MIR9-3-201ENST00000385084 90 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 RNU6-1148P-201ENST00000410992 104 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 RNU6-325P-201ENST00000411132 105 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 RNU6-373P-201ENST00000411247 98 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 HMGB3P2-201ENST00000411913 584 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 AC009161.1-201ENST00000417306 376 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 ZNF885P-201ENST00000420174 1098 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.97□□□□□ -2.09
PDGFBP01127 AC244670.1-201ENST00000436879 112 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 RPL23AP6-201ENST00000446637 472 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 AC013470.1-201ENST00000453438 462 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 TRBVA-201ENST00000498804 316 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 PTP4A1P4-201ENST00000512479 322 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 MIR449C-201ENST00000516047 92 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 SNORA31.16-201ENST00000516773 139 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 RNU6-1314P-201ENST00000517139 104 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.97□□□□□ -2.09
PDGFBP01127 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.97□□□□□ -2.09
PDGFBP01127 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 BNIP3P16-201ENST00000589779 534 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 AC008749.1-201ENST00000597650 306 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 MIR3976-201ENST00000606807 139 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 AC002553.4-201ENST00000616896 331 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 AL359314.1-201ENST00000616913 261 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 AC233981.2-201ENST00000611524 1614 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 MTND4P23-201ENST00000447723 1363 ntBASIC1.97□□□□□ -2.09
PDGFBP01127 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PDGFBP01127 RNA5SP276-201ENST00000362580 94 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 SNORD115-3-201ENST00000363100 82 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 SNORD113-7-201ENST00000363762 77 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 RNU6-933P-201ENST00000384424 107 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 Y_RNA.540-201ENST00000384638 111 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 SNORA12-201ENST00000391162 147 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 AL356432.1-201ENST00000405809 419 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 MIR1276-201ENST00000408707 83 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 RNU2-20P-201ENST00000410425 191 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 SNRPEP10-201ENST00000420249 274 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 AL513185.2-201ENST00000425543 193 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 MTATP6P13-201ENST00000438531 667 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 MTCO2P3-201ENST00000442543 421 ntBASIC1.96□□□□□ -2.1
PDGFBP01127 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms