Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN1O95832 AC133104.2-201ENST00000615272 193 ntBASIC2.15□□□□□ -2.07
CLDN1O95832 AC084781.2-201ENST00000615568 161 ntBASIC2.15□□□□□ -2.07
CLDN1O95832 PISRT1.1-201ENST00000616930 107 ntBASIC2.15□□□□□ -2.07
CLDN1O95832 AC022140.2-201ENST00000623500 188 ntBASIC2.15□□□□□ -2.07
CLDN1O95832 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.15□□□□□ -2.07
CLDN1O95832 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN1O95832 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLDN1O95832 RNU6-1115P-201ENST00000362490 106 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 RNU1-72P-201ENST00000362976 153 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 SNORD114-19-201ENST00000363072 75 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 Y_RNA.123-201ENST00000363338 102 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 RNU6-1286P-201ENST00000383871 107 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 Y_RNA.394-201ENST00000383942 103 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 Y_RNA.395-201ENST00000383945 109 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 Y_RNA.419-201ENST00000384041 102 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 RNU6-890P-201ENST00000384121 107 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 RNU1-57P-201ENST00000384491 166 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 MIR186-201ENST00000384988 86 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN1O95832 Z82205.1-201ENST00000428456 297 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN1O95832 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN1O95832 AC016632.1-201ENST00000503994 196 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 AC022447.4-201ENST00000504053 364 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 AC108729.3-201ENST00000513484 108 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN1O95832 RNA5SP112-201ENST00000515937 99 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 SCARNA16.2-201ENST00000516520 172 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 RNU6-307P-201ENST00000516743 106 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN1O95832 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN1O95832 MIR5701-3-201ENST00000578890 82 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 MIR3117-201ENST00000584034 78 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 MIR5701-1-201ENST00000585138 82 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 AC073410.2-201ENST00000603240 332 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 AC005014.2-201ENST00000607795 599 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 MIR5701-2-201ENST00000615634 82 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 MIR6873-201ENST00000622788 63 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 ZNF299P-201ENST00000406845 1804 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 MTND5P10-201ENST00000603719 1809 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN1O95832 ZNF271P-202ENST00000465539 1970 ntBASIC2.14□□□□□ -2.07
CLDN1O95832 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
CLDN1O95832 AC009541.1-201ENST00000438279 2662 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RNU5B-2P-201ENST00000363036 113 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RNU6-486P-201ENST00000363116 107 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RNU6-529P-201ENST00000363383 104 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RNU6-595P-201ENST00000363944 107 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RNU6-1040P-201ENST00000383974 107 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 MIR559-201ENST00000385188 96 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CLDN1O95832 Y_RNA.579-201ENST00000390939 94 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RNU6-1304P-201ENST00000411374 106 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN1O95832 AC097463.2-201ENST00000421074 142 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AL358453.1-201ENST00000422522 250 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 EIF4EP4-201ENST00000424916 578 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN1O95832 AC244670.1-201ENST00000436879 112 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AL445687.1-201ENST00000439946 251 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN1O95832 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN1O95832 AC112771.1-201ENST00000463581 102 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RPL30P12-201ENST00000474666 353 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AL121594.1-201ENST00000475906 575 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 FO393415.2-201ENST00000480085 343 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RPL36AP48-201ENST00000485521 314 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RPL30P10-201ENST00000488148 337 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RPL30P1-201ENST00000488676 339 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AC090096.1-201ENST00000489168 390 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 RPL22P13-201ENST00000493291 347 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN1O95832 RNU6-1053P-201ENST00000515930 101 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 CBX3P8-201ENST00000532412 525 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN1O95832 AC093249.1-201ENST00000567049 203 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AC105137.2-201ENST00000569073 466 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 MIR4498-201ENST00000577599 66 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 MIR4765-201ENST00000585007 77 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 MIR4781-201ENST00000585250 76 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 CYP2C61P-201ENST00000604072 290 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 AC103810.6-201ENST00000606708 136 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 SCARNA4-201ENST00000629045 128 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 MIR7157-201ENST00000635801 60 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.13□□□□□ -2.07
CLDN1O95832 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN1O95832 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN1O95832 MIR6073-201ENST00000352083 89 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 Y_RNA.2-201ENST00000362330 96 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 SNORA25.6-201ENST00000364121 118 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 Y_RNA.269-201ENST00000364685 89 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 Y_RNA.533-201ENST00000384596 114 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 RNA5SP213-201ENST00000391031 106 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 AL354751.2-201ENST00000415471 210 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN1O95832 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN1O95832 AC008267.5-201ENST00000424928 265 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 MTND1P14-201ENST00000427400 950 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 Z98742.2-201ENST00000431564 187 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms