Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SIX3O95343 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.02□□□□□ -2.09
SIX3O95343 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.02□□□□□ -2.09
SIX3O95343 AC096638.1-201ENST00000444678 216 ntBASIC2.02□□□□□ -2.09
SIX3O95343 RNU7-14P-201ENST00000459331 62 ntBASIC2.02□□□□□ -2.09
SIX3O95343 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.02□□□□□ -2.09
SIX3O95343 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
SIX3O95343 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.02□□□□□ -2.09
SIX3O95343 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.02□□□□□ -2.09
SIX3O95343 SCOCP1-201ENST00000554676 349 ntBASIC2.02□□□□□ -2.09
SIX3O95343 ANP32BP3-201ENST00000559213 706 ntBASIC2.02□□□□□ -2.09
SIX3O95343 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.02□□□□□ -2.09
SIX3O95343 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.02□□□□□ -2.09
SIX3O95343 SNORA4-201ENST00000584302 138 ntBASIC2.02□□□□□ -2.09
SIX3O95343 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
SIX3O95343 AC064807.4-201ENST00000607201 407 ntBASIC2.02□□□□□ -2.09
SIX3O95343 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
SIX3O95343 AL359314.1-201ENST00000616913 261 ntBASIC2.02□□□□□ -2.09
SIX3O95343 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
SIX3O95343 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SIX3O95343 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SIX3O95343 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SIX3O95343 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SIX3O95343 SNORD114-26-201ENST00000363543 72 ntBASIC2.01□□□□□ -2.09
SIX3O95343 Y_RNA.178-201ENST00000363832 102 ntBASIC2.01□□□□□ -2.09
SIX3O95343 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
SIX3O95343 RNU4-12P-201ENST00000365233 139 ntBASIC2.01□□□□□ -2.09
SIX3O95343 RNU6-968P-201ENST00000384076 107 ntBASIC2.01□□□□□ -2.09
SIX3O95343 Y_RNA.573-201ENST00000384763 105 ntBASIC2.01□□□□□ -2.09
SIX3O95343 AC027124.2-201ENST00000428249 105 ntBASIC2.01□□□□□ -2.09
SIX3O95343 AL589823.1-201ENST00000429577 183 ntBASIC2.01□□□□□ -2.09
SIX3O95343 AL353689.1-201ENST00000438895 199 ntBASIC2.01□□□□□ -2.09
SIX3O95343 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.01□□□□□ -2.09
SIX3O95343 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.01□□□□□ -2.09
SIX3O95343 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.01□□□□□ -2.09
SIX3O95343 snoU13.6-201ENST00000458785 104 ntBASIC2.01□□□□□ -2.09
SIX3O95343 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.01□□□□□ -2.09
SIX3O95343 AC096745.1-201ENST00000509945 370 ntBASIC2.01□□□□□ -2.09
SIX3O95343 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
SIX3O95343 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
SIX3O95343 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
SIX3O95343 AC016957.1-201ENST00000534895 309 ntBASIC2.01□□□□□ -2.09
SIX3O95343 AC026464.5-201ENST00000562497 722 ntBASIC2.01□□□□□ -2.09
SIX3O95343 U1.36-201ENST00000620684 176 ntBASIC2.01□□□□□ -2.09
SIX3O95343 MIR6873-201ENST00000622788 63 ntBASIC2.01□□□□□ -2.09
SIX3O95343 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SIX3O95343 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SIX3O95343 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.01□□□□□ -2.09
SIX3O95343 AL356292.1-201ENST00000283110 373 ntBASIC2□□□□□ -2.09
SIX3O95343 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2□□□□□ -2.09
SIX3O95343 RNY3P3-201ENST00000363816 102 ntBASIC2□□□□□ -2.09
SIX3O95343 RNU6-877P-201ENST00000383868 107 ntBASIC2□□□□□ -2.09
SIX3O95343 RNU6-128P-201ENST00000383976 107 ntBASIC2□□□□□ -2.09
SIX3O95343 AL356432.1-201ENST00000405809 419 ntBASIC2□□□□□ -2.09
SIX3O95343 RNU6-908P-201ENST00000410160 94 ntBASIC2□□□□□ -2.09
SIX3O95343 RNA5SP201-201ENST00000410316 124 ntBASIC2□□□□□ -2.09
SIX3O95343 RNU2-41P-201ENST00000410991 178 ntBASIC2□□□□□ -2.09
SIX3O95343 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2□□□□□ -2.09
SIX3O95343 RPS23P5-201ENST00000495419 428 ntBASIC2□□□□□ -2.09
SIX3O95343 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2□□□□□ -2.09
SIX3O95343 BNIP3P25-201ENST00000596023 559 ntBASIC2□□□□□ -2.09
SIX3O95343 SNORA43.4-201ENST00000629559 138 ntBASIC2□□□□□ -2.09
SIX3O95343 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SIX3O95343 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
SIX3O95343 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
SIX3O95343 RNU1-17P-201ENST00000363022 152 ntBASIC1.99□□□□□ -2.09
SIX3O95343 SNORA67.3-201ENST00000384366 140 ntBASIC1.99□□□□□ -2.09
SIX3O95343 RNA5SP213-201ENST00000391031 106 ntBASIC1.99□□□□□ -2.09
SIX3O95343 RNU6-373P-201ENST00000411247 98 ntBASIC1.99□□□□□ -2.09
SIX3O95343 AL030996.1-201ENST00000411430 235 ntBASIC1.99□□□□□ -2.09
SIX3O95343 AC009161.1-201ENST00000417306 376 ntBASIC1.99□□□□□ -2.09
SIX3O95343 AL158823.1-201ENST00000418441 478 ntBASIC1.99□□□□□ -2.09
SIX3O95343 AC108667.1-201ENST00000428618 249 ntBASIC1.99□□□□□ -2.09
SIX3O95343 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.99□□□□□ -2.09
SIX3O95343 SNRPEP8-201ENST00000442866 260 ntBASIC1.99□□□□□ -2.09
SIX3O95343 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
SIX3O95343 AC007547.1-201ENST00000462177 490 ntBASIC1.99□□□□□ -2.09
SIX3O95343 TRBVA-201ENST00000498804 316 ntBASIC1.99□□□□□ -2.09
SIX3O95343 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.99□□□□□ -2.09
SIX3O95343 AC100830.2-201ENST00000581636 240 ntBASIC1.99□□□□□ -2.09
SIX3O95343 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.99□□□□□ -2.09
SIX3O95343 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.99□□□□□ -2.09
SIX3O95343 AC104458.1-201ENST00000608243 463 ntBASIC1.99□□□□□ -2.09
SIX3O95343 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.99□□□□□ -2.09
SIX3O95343 AL162373.1-201ENST00000620433 407 ntBASIC1.99□□□□□ -2.09
SIX3O95343 RNU6-1164P-201ENST00000364428 107 ntBASIC1.98□□□□□ -2.09
SIX3O95343 RNU6-522P-201ENST00000364497 107 ntBASIC1.98□□□□□ -2.09
SIX3O95343 RNY1P14-201ENST00000384426 108 ntBASIC1.98□□□□□ -2.09
SIX3O95343 RNU6-332P-201ENST00000391193 108 ntBASIC1.98□□□□□ -2.09
SIX3O95343 RN7SKP32-201ENST00000410167 303 ntBASIC1.98□□□□□ -2.09
SIX3O95343 Z82205.1-201ENST00000428456 297 ntBASIC1.98□□□□□ -2.09
SIX3O95343 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.98□□□□□ -2.09
SIX3O95343 AL353572.1-201ENST00000442490 417 ntBASIC1.98□□□□□ -2.09
SIX3O95343 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.98□□□□□ -2.09
SIX3O95343 Y_RNA.665-201ENST00000516177 98 ntBASIC1.98□□□□□ -2.09
SIX3O95343 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SIX3O95343 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.98□□□□□ -2.09
SIX3O95343 AC016256.1-201ENST00000547971 354 ntBASIC1.98□□□□□ -2.09
SIX3O95343 MIR4299-201ENST00000577899 72 ntBASIC1.98□□□□□ -2.09
SIX3O95343 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms