Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RNU6-432P-201ENST00000384196 109 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 AL590084.2-201ENST00000401481 382 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 RNU2-28P-201ENST00000410457 189 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.57□□□□□ -2.5
LTN1O94822 MTATP6P30-201ENST00000443540 664 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.57□□□□□ -2.5
LTN1O94822 OR9P1P-201ENST00000496431 281 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.57□□□□□ -2.5
LTN1O94822 SUB1P2-201ENST00000556401 297 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 MIR4743-201ENST00000584576 69 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 MIR3529-201ENST00000637713 78 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 SGO1P1-201ENST00000603525 1447 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 RNY4P16-201ENST00000364768 94 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 SNORA72.2-201ENST00000365028 127 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 RNU6-487P-201ENST00000365430 104 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 RNU6-929P-201ENST00000384429 107 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 RN7SKP266-201ENST00000410232 287 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 AC019178.2-201ENST00000423595 505 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 VN1R10P-201ENST00000447106 875 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.57□□□□□ -2.5
LTN1O94822 RNU7-34P-201ENST00000459394 64 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 AC009712.1-201ENST00000564938 316 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 AC005176.2-201ENST00000596933 147 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 MIR8076-201ENST00000611401 83 ntBASIC-0.57□□□□□ -2.5
LTN1O94822 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
LTN1O94822 RNU6-843P-201ENST00000384454 104 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 TPMTP2-201ENST00000414372 726 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 AL139396.1-201ENST00000421137 167 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 AC010154.1-201ENST00000425857 269 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 BTF3P11-201ENST00000426582 477 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 AC003071.1-201ENST00000451219 789 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 AC245047.8-201ENST00000456455 284 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 AL157871.3-201ENST00000557231 293 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 AC025678.1-201ENST00000567861 338 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 AL929325.1-201ENST00000603096 117 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 AC104695.3-201ENST00000604052 296 ntBASIC-0.58□□□□□ -2.5
LTN1O94822 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
LTN1O94822 SNORD14C-201ENST00000365382 88 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 RNU6-679P-201ENST00000391003 106 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 MIR892B-201ENST00000401279 77 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 AL451046.2-201ENST00000403074 277 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 SNX3P1X-201ENST00000414887 175 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 MTATP6P16-201ENST00000434543 526 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 SNRPEP8-201ENST00000442866 260 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 AC093809.1-201ENST00000509155 340 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 SNORA70.12-201ENST00000516084 153 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 RNU1-86P-201ENST00000516108 154 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 RNU1-107P-201ENST00000516617 154 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 RNU6-143P-201ENST00000516942 93 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.59□□□□□ -2.5
LTN1O94822 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.59□□□□□ -2.5
LTN1O94822 AC004223.2-201ENST00000590309 544 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 AL390208.1-201ENST00000605885 644 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 MIR198-201ENST00000637333 62 ntBASIC-0.59□□□□□ -2.5
LTN1O94822 RNU6-534P-201ENST00000364877 106 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 SNORD116-23-201ENST00000384645 92 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 RNU6-747P-201ENST00000390928 104 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 RNU6-241P-201ENST00000391148 104 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 SNORA12-201ENST00000391162 147 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.6□□□□□ -2.5
LTN1O94822 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.6□□□□□ -2.5
LTN1O94822 AC114811.1-201ENST00000507207 168 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 RNU4-49P-201ENST00000516080 140 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 AC009902.1-201ENST00000519351 183 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.6□□□□□ -2.5
LTN1O94822 AC090615.1-201ENST00000577519 154 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.6□□□□□ -2.5
LTN1O94822 MIR4742-201ENST00000581069 85 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 BNIP3P30-201ENST00000601184 574 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 uc_338.36-201ENST00000622331 158 ntBASIC-0.6□□□□□ -2.5
LTN1O94822 SNORD115-24-201ENST00000363528 82 ntBASIC-0.6□□□□□ -2.51
LTN1O94822 SNORD71-201ENST00000411292 86 ntBASIC-0.6□□□□□ -2.51
LTN1O94822 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.6□□□□□ -2.51
LTN1O94822 AC096531.1-201ENST00000419107 107 ntBASIC-0.6□□□□□ -2.51
LTN1O94822 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.6□□□□□ -2.51
LTN1O94822 AC093019.1-201ENST00000443135 252 ntBASIC-0.6□□□□□ -2.51
LTN1O94822 AL929288.2-201ENST00000446368 407 ntBASIC-0.6□□□□□ -2.51
LTN1O94822 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.6□□□□□ -2.51
LTN1O94822 RNU2-12P-201ENST00000517216 168 ntBASIC-0.6□□□□□ -2.51
LTN1O94822 RNU6-166P-201ENST00000384371 107 ntBASIC-0.61□□□□□ -2.51
LTN1O94822 MIR16-1-201ENST00000385271 89 ntBASIC-0.61□□□□□ -2.51
LTN1O94822 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.61□□□□□ -2.51
LTN1O94822 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.61□□□□□ -2.51
LTN1O94822 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.61□□□□□ -2.51
LTN1O94822 AC022868.1-201ENST00000517767 391 ntBASIC-0.61□□□□□ -2.51
LTN1O94822 AC105185.1-201ENST00000518705 535 ntBASIC-0.61□□□□□ -2.51
LTN1O94822 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.61□□□□□ -2.51
LTN1O94822 AC131055.1-201ENST00000584626 316 ntBASIC-0.61□□□□□ -2.51
LTN1O94822 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.61□□□□□ -2.51
LTN1O94822 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.62□□□□□ -2.51
LTN1O94822 AC091163.3-201ENST00000518269 1144 ntBASIC-0.62□□□□□ -2.51
LTN1O94822 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.62□□□□□ -2.51
LTN1O94822 AC109446.1-201ENST00000566172 220 ntBASIC-0.62□□□□□ -2.51
LTN1O94822 AC023827.1-201ENST00000569247 97 ntBASIC-0.62□□□□□ -2.51
LTN1O94822 BNIP3P9-201ENST00000603714 553 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms