Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.55□□□□□ -2
TSPAN3O60637 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
TSPAN3O60637 U4atac.1-201ENST00000618345 95 ntBASIC2.55□□□□□ -2
TSPAN3O60637 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.55□□□□□ -2
TSPAN3O60637 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TSPAN3O60637 SNORA3A-201ENST00000364113 130 ntBASIC2.54□□□□□ -2
TSPAN3O60637 Y_RNA.263-201ENST00000364659 114 ntBASIC2.54□□□□□ -2
TSPAN3O60637 RNU6-596P-201ENST00000365395 98 ntBASIC2.54□□□□□ -2
TSPAN3O60637 SNORA25B-201ENST00000365507 128 ntBASIC2.54□□□□□ -2
TSPAN3O60637 Y_RNA.404-201ENST00000383978 102 ntBASIC2.54□□□□□ -2
TSPAN3O60637 RNU6-331P-201ENST00000384724 107 ntBASIC2.54□□□□□ -2
TSPAN3O60637 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
TSPAN3O60637 MIR1294-201ENST00000408503 142 ntBASIC2.54□□□□□ -2
TSPAN3O60637 AL358453.1-201ENST00000422522 250 ntBASIC2.54□□□□□ -2
TSPAN3O60637 RPL23AP50-201ENST00000434149 455 ntBASIC2.54□□□□□ -2
TSPAN3O60637 RNU6-277P-201ENST00000516272 106 ntBASIC2.54□□□□□ -2
TSPAN3O60637 RNA5SP384-201ENST00000516615 116 ntBASIC2.54□□□□□ -2
TSPAN3O60637 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.54□□□□□ -2
TSPAN3O60637 AL008636.1-201ENST00000625038 1018 ntBASIC2.54□□□□□ -2
TSPAN3O60637 AL669831.3-213ENST00000636676 183 ntBASIC2.54□□□□□ -2
TSPAN3O60637 AC112487.2-201ENST00000637950 304 ntBASIC2.54□□□□□ -2
TSPAN3O60637 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
TSPAN3O60637 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.53□□□□□ -2
TSPAN3O60637 RNU6-1159P-201ENST00000362933 107 ntBASIC2.53□□□□□ -2
TSPAN3O60637 U8.2-201ENST00000363156 134 ntBASIC2.53□□□□□ -2
TSPAN3O60637 Y_RNA.384-201ENST00000383909 102 ntBASIC2.53□□□□□ -2
TSPAN3O60637 MIR504-201ENST00000385065 83 ntBASIC2.53□□□□□ -2
TSPAN3O60637 MIR549A-201ENST00000385268 96 ntBASIC2.53□□□□□ -2
TSPAN3O60637 SNORA3.2-201ENST00000408221 125 ntBASIC2.53□□□□□ -2
TSPAN3O60637 AL353997.1-201ENST00000432936 108 ntBASIC2.53□□□□□ -2
TSPAN3O60637 snoU13.26-201ENST00000459452 105 ntBASIC2.53□□□□□ -2
TSPAN3O60637 AC018868.1-201ENST00000491307 315 ntBASIC2.53□□□□□ -2
TSPAN3O60637 RN7SL636P-201ENST00000497504 294 ntBASIC2.53□□□□□ -2
TSPAN3O60637 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.53□□□□□ -2
TSPAN3O60637 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
TSPAN3O60637 RNU6-667P-201ENST00000517186 102 ntBASIC2.53□□□□□ -2
TSPAN3O60637 EIF4A1P12-201ENST00000551910 141 ntBASIC2.53□□□□□ -2
TSPAN3O60637 FRG2DP-202ENST00000566967 323 ntBASIC2.53□□□□□ -2
TSPAN3O60637 AL355375.2-201ENST00000574825 175 ntBASIC2.53□□□□□ -2
TSPAN3O60637 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.53□□□□□ -2
TSPAN3O60637 MIR7843-201ENST00000622274 79 ntBASIC2.53□□□□□ -2
TSPAN3O60637 MTND4LP32-201ENST00000636111 270 ntBASIC2.53□□□□□ -2
TSPAN3O60637 ZNF658B-202ENST00000615961 3375 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
TSPAN3O60637 SNORD32B-201ENST00000364460 84 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 RNU4-9P-201ENST00000364951 139 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 RNU6-867P-201ENST00000364956 107 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 MIR32-201ENST00000384965 70 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 MIR487A-201ENST00000385009 80 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 RN7SKP192-201ENST00000411291 327 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.52□□□□□ -2.01
TSPAN3O60637 CBX3P6-201ENST00000430257 527 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.52□□□□□ -2.01
TSPAN3O60637 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.52□□□□□ -2.01
TSPAN3O60637 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.52□□□□□ -2.01
TSPAN3O60637 SCARNA16.2-201ENST00000516520 172 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.52□□□□□ -2.01
TSPAN3O60637 AC022616.8-201ENST00000533569 253 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 APOOP3-201ENST00000536787 586 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.52□□□□□ -2.01
TSPAN3O60637 AC090517.1-201ENST00000569307 266 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 MIR5696-201ENST00000578474 85 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.52□□□□□ -2.01
TSPAN3O60637 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 AC010928.2-201ENST00000588017 287 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.52□□□□□ -2.01
TSPAN3O60637 7SK.7-201ENST00000603504 247 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 SCARNA4-201ENST00000629045 128 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.52□□□□□ -2.01
TSPAN3O60637 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TSPAN3O60637 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TSPAN3O60637 ZNF299P-201ENST00000406845 1804 ntBASIC2.52□□□□□ -2.01
TSPAN3O60637 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
TSPAN3O60637 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TSPAN3O60637 RNA5SP456-201ENST00000364002 114 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 RNU5E-4P-201ENST00000364931 120 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.51□□□□□ -2.01
TSPAN3O60637 Y_RNA.387-201ENST00000383918 102 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 RNU6-1297P-201ENST00000384415 104 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TSPAN3O60637 AC243428.1-201ENST00000421099 264 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.51□□□□□ -2.01
TSPAN3O60637 USMG5P1-201ENST00000425964 177 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.51□□□□□ -2.01
TSPAN3O60637 SNRPEP8-201ENST00000442866 260 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 AC107032.1-201ENST00000485945 480 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 ANXA2P1-201ENST00000505539 926 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.51□□□□□ -2.01
TSPAN3O60637 AC021269.2-201ENST00000532318 330 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 AC093027.1-201ENST00000546698 429 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 AC009127.3-201ENST00000570531 403 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.51□□□□□ -2.01
TSPAN3O60637 AC046143.2-201ENST00000609789 160 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.51□□□□□ -2.01
TSPAN3O60637 AC005520.5-201ENST00000613926 164 ntBASIC2.51□□□□□ -2.01
TSPAN3O60637 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.51□□□□□ -2.01
TSPAN3O60637 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
TSPAN3O60637 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms