Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 EIF4EP2-201ENST00000422816 654 ntBASIC2.02□□□□□ -2.09
SNX3O60493 RPS3AP52-201ENST00000435639 297 ntBASIC2.02□□□□□ -2.09
SNX3O60493 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.02□□□□□ -2.09
SNX3O60493 HMGB1P18-201ENST00000438801 619 ntBASIC2.02□□□□□ -2.09
SNX3O60493 AC087477.1-201ENST00000465747 340 ntBASIC2.02□□□□□ -2.09
SNX3O60493 AC103851.1-201ENST00000506833 274 ntBASIC2.02□□□□□ -2.09
SNX3O60493 RNA5SP148-201ENST00000516527 94 ntBASIC2.02□□□□□ -2.09
SNX3O60493 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.02□□□□□ -2.09
SNX3O60493 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.02□□□□□ -2.09
SNX3O60493 EIF4BP1-201ENST00000554881 351 ntBASIC2.02□□□□□ -2.09
SNX3O60493 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.02□□□□□ -2.09
SNX3O60493 AC090517.1-201ENST00000569307 266 ntBASIC2.02□□□□□ -2.09
SNX3O60493 AC026271.5-201ENST00000577873 130 ntBASIC2.02□□□□□ -2.09
SNX3O60493 RBM11P1-201ENST00000604951 799 ntBASIC2.02□□□□□ -2.09
SNX3O60493 AP000654.2-201ENST00000605633 586 ntBASIC2.02□□□□□ -2.09
SNX3O60493 MIR6817-201ENST00000615588 66 ntBASIC2.02□□□□□ -2.09
SNX3O60493 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.02□□□□□ -2.09
SNX3O60493 MIR203B-201ENST00000636080 86 ntBASIC2.02□□□□□ -2.09
SNX3O60493 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
SNX3O60493 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
SNX3O60493 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.01□□□□□ -2.09
SNX3O60493 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SNX3O60493 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SNX3O60493 MTND5P9-201ENST00000503854 1755 ntBASIC2.01□□□□□ -2.09
SNX3O60493 Y_RNA.166-201ENST00000363730 102 ntBASIC2.01□□□□□ -2.09
SNX3O60493 SNORA6-201ENST00000384033 151 ntBASIC2.01□□□□□ -2.09
SNX3O60493 RNU6-842P-201ENST00000384269 107 ntBASIC2.01□□□□□ -2.09
SNX3O60493 Y_RNA.473-201ENST00000384333 102 ntBASIC2.01□□□□□ -2.09
SNX3O60493 SNORA11.1-201ENST00000408133 129 ntBASIC2.01□□□□□ -2.09
SNX3O60493 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
SNX3O60493 AL358453.1-201ENST00000422522 250 ntBASIC2.01□□□□□ -2.09
SNX3O60493 AC025750.2-201ENST00000442609 450 ntBASIC2.01□□□□□ -2.09
SNX3O60493 SNORD5.1-201ENST00000458800 75 ntBASIC2.01□□□□□ -2.09
SNX3O60493 AC132942.1-201ENST00000486753 483 ntBASIC2.01□□□□□ -2.09
SNX3O60493 AC093259.1-201ENST00000509755 300 ntBASIC2.01□□□□□ -2.09
SNX3O60493 RNA5SP356-201ENST00000515972 94 ntBASIC2.01□□□□□ -2.09
SNX3O60493 SNORA31.25-201ENST00000517242 134 ntBASIC2.01□□□□□ -2.09
SNX3O60493 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.01□□□□□ -2.09
SNX3O60493 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.01□□□□□ -2.09
SNX3O60493 AC005668.1-201ENST00000571142 476 ntBASIC2.01□□□□□ -2.09
SNX3O60493 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.01□□□□□ -2.09
SNX3O60493 AC012640.5-201ENST00000623897 319 ntBASIC2.01□□□□□ -2.09
SNX3O60493 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.01□□□□□ -2.09
SNX3O60493 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.01□□□□□ -2.09
SNX3O60493 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
SNX3O60493 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SNX3O60493 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SNX3O60493 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SNX3O60493 SNORD81.2-201ENST00000365153 76 ntBASIC2□□□□□ -2.09
SNX3O60493 RNU6-596P-201ENST00000365395 98 ntBASIC2□□□□□ -2.09
SNX3O60493 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2□□□□□ -2.09
SNX3O60493 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SNX3O60493 MIR487A-201ENST00000385009 80 ntBASIC2□□□□□ -2.09
SNX3O60493 MIR549A-201ENST00000385268 96 ntBASIC2□□□□□ -2.09
SNX3O60493 HMGN2P39-201ENST00000398005 273 ntBASIC2□□□□□ -2.09
SNX3O60493 RNU6-174P-201ENST00000410406 106 ntBASIC2□□□□□ -2.09
SNX3O60493 RNA5SP184-201ENST00000411071 108 ntBASIC2□□□□□ -2.09
SNX3O60493 RPS26P42-201ENST00000413485 326 ntBASIC2□□□□□ -2.09
SNX3O60493 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
SNX3O60493 Z82188.1-201ENST00000436709 154 ntBASIC2□□□□□ -2.09
SNX3O60493 HMGN2P18-201ENST00000450680 270 ntBASIC2□□□□□ -2.09
SNX3O60493 AC107399.1-201ENST00000451226 265 ntBASIC2□□□□□ -2.09
SNX3O60493 OR2AQ1P-201ENST00000451972 200 ntBASIC2□□□□□ -2.09
SNX3O60493 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2□□□□□ -2.09
SNX3O60493 HMGN1P12-201ENST00000499125 195 ntBASIC2□□□□□ -2.09
SNX3O60493 AC026782.1-201ENST00000512952 449 ntBASIC2□□□□□ -2.09
SNX3O60493 RNU6-1098P-201ENST00000516772 96 ntBASIC2□□□□□ -2.09
SNX3O60493 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2□□□□□ -2.09
SNX3O60493 MIR4319-201ENST00000577285 85 ntBASIC2□□□□□ -2.09
SNX3O60493 MIR4801-201ENST00000582704 82 ntBASIC2□□□□□ -2.09
SNX3O60493 MIR4273-201ENST00000582824 84 ntBASIC2□□□□□ -2.09
SNX3O60493 AC010928.2-201ENST00000588017 287 ntBASIC2□□□□□ -2.09
SNX3O60493 AC016727.2-201ENST00000603988 621 ntBASIC2□□□□□ -2.09
SNX3O60493 AC018462.2-201ENST00000605375 395 ntBASIC2□□□□□ -2.09
SNX3O60493 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2□□□□□ -2.09
SNX3O60493 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2□□□□□ -2.09
SNX3O60493 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2□□□□□ -2.09
SNX3O60493 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2□□□□□ -2.09
SNX3O60493 AC006386.2-201ENST00000624491 75 ntBASIC2□□□□□ -2.09
SNX3O60493 AC012005.1-201ENST00000624575 75 ntBASIC2□□□□□ -2.09
SNX3O60493 KPNA2P1-201ENST00000458289 1591 ntBASIC2□□□□□ -2.09
SNX3O60493 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2□□□□□ -2.09
SNX3O60493 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SNX3O60493 RNU6-1159P-201ENST00000362933 107 ntBASIC1.99□□□□□ -2.09
SNX3O60493 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
SNX3O60493 Y_RNA.533-201ENST00000384596 114 ntBASIC1.99□□□□□ -2.09
SNX3O60493 MIR483-201ENST00000385070 76 ntBASIC1.99□□□□□ -2.09
SNX3O60493 U3.40-201ENST00000408706 208 ntBASIC1.99□□□□□ -2.09
SNX3O60493 SRIP3-201ENST00000413200 219 ntBASIC1.99□□□□□ -2.09
SNX3O60493 RPL23AP83-201ENST00000434984 473 ntBASIC1.99□□□□□ -2.09
SNX3O60493 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.99□□□□□ -2.09
SNX3O60493 AC098614.3-201ENST00000438957 440 ntBASIC1.99□□□□□ -2.09
SNX3O60493 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.99□□□□□ -2.09
SNX3O60493 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.99□□□□□ -2.09
SNX3O60493 ATP5EP1-201ENST00000510257 156 ntBASIC1.99□□□□□ -2.09
SNX3O60493 RNU6-1016P-201ENST00000516689 94 ntBASIC1.99□□□□□ -2.09
SNX3O60493 RNA5SP490-201ENST00000517141 136 ntBASIC1.99□□□□□ -2.09
SNX3O60493 DEFB131C-201ENST00000528817 165 ntBASIC1.99□□□□□ -2.09
SNX3O60493 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.99□□□□□ -2.09
SNX3O60493 MIR5696-201ENST00000578474 85 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms