Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MIR487A-201ENST00000385009 80 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 MIR625-201ENST00000385047 85 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 MIR153-2-201ENST00000385225 87 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.39□□□□□ -2.03
ZIC3O60481 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.39□□□□□ -2.03
ZIC3O60481 ARL5AP4-201ENST00000430731 512 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.39□□□□□ -2.03
ZIC3O60481 CHEK2P4-201ENST00000450340 246 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.39□□□□□ -2.03
ZIC3O60481 Y_RNA.706-201ENST00000516933 99 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 RNU7-4P-201ENST00000516961 62 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 AC092447.9-201ENST00000603395 144 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 AL713866.2-201ENST00000603579 219 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.39□□□□□ -2.03
ZIC3O60481 Y_RNA.812-201ENST00000610788 101 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 Y_RNA.784-201ENST00000613803 101 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 Y_RNA.787-201ENST00000616522 101 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 Y_RNA.780-201ENST00000617336 101 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 Y_RNA.801-201ENST00000619005 101 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
ZIC3O60481 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.38□□□□□ -2.03
ZIC3O60481 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ZIC3O60481 Y_RNA.106-201ENST00000363189 100 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 Y_RNA.364-201ENST00000365532 101 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 SET-203ENST00000372688 801 ntTSL 2 BASIC2.38□□□□□ -2.03
ZIC3O60481 RNU6-1032P-201ENST00000384100 107 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 MIR196B-201ENST00000384852 84 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 FO393413.1-201ENST00000402892 195 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 AL590004.1-201ENST00000405321 300 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 SNORD88.1-201ENST00000408684 91 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.38□□□□□ -2.03
ZIC3O60481 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.38□□□□□ -2.03
ZIC3O60481 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.38□□□□□ -2.03
ZIC3O60481 AC023141.11-201ENST00000508864 202 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.38□□□□□ -2.03
ZIC3O60481 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.38□□□□□ -2.03
ZIC3O60481 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.38□□□□□ -2.03
ZIC3O60481 RNA5SP76-201ENST00000516277 87 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 RNU4-77P-201ENST00000516692 156 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 RNU6-988P-201ENST00000519081 107 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 AC027288.2-201ENST00000553028 243 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.38□□□□□ -2.03
ZIC3O60481 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.38□□□□□ -2.03
ZIC3O60481 MIR4635-201ENST00000583759 79 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 RPL12P50-201ENST00000603116 116 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 AC069294.1-201ENST00000608397 350 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 AC006157.1-201ENST00000611750 366 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.38□□□□□ -2.03
ZIC3O60481 AC107871.2-201ENST00000612894 502 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 PCGEM1.1-201ENST00000613431 131 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 AC083806.3-201ENST00000614016 455 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ZIC3O60481 AC026241.1-201ENST00000517873 2142 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 AC069528.2-201ENST00000624849 1991 ntBASIC2.38□□□□□ -2.03
ZIC3O60481 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ZIC3O60481 RNU6-1159P-201ENST00000362933 107 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 SNORD115-8-201ENST00000363856 82 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 RNY3P11-201ENST00000364153 102 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 SNORD115-38-201ENST00000365037 82 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 SNORA33.2-201ENST00000365413 134 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 RNU6-378P-201ENST00000384324 107 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 RNA5SP492-201ENST00000411330 114 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 AC090515.1-201ENST00000465295 476 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 AC145146.1-201ENST00000496370 254 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.37□□□□□ -2.03
ZIC3O60481 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ZIC3O60481 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.37□□□□□ -2.03
ZIC3O60481 HSPE1P20-201ENST00000538133 289 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.37□□□□□ -2.03
ZIC3O60481 MIR4672-201ENST00000583126 81 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.37□□□□□ -2.03
ZIC3O60481 SNORD58B-201ENST00000607313 66 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 MIR4272-201ENST00000635924 64 ntBASIC2.37□□□□□ -2.03
ZIC3O60481 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
ZIC3O60481 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZIC3O60481 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 RNU6-137P-201ENST00000363680 108 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 MIR627-201ENST00000384979 97 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 RNU6-220P-201ENST00000390919 107 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 RNA5SP213-201ENST00000391031 106 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 SNORA46.1-201ENST00000391069 153 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 RNU6-1093P-201ENST00000391194 107 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 MIR208B-201ENST00000401172 77 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 HMGB3P2-201ENST00000411913 584 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.36□□□□□ -2.03
ZIC3O60481 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.36□□□□□ -2.03
ZIC3O60481 AC007215.1-201ENST00000464893 276 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.36□□□□□ -2.03
ZIC3O60481 ANXA2P1-201ENST00000505539 926 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 SNORA25.10-201ENST00000515926 124 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 SCARNA15.1-201ENST00000516384 125 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 RNU6-58P-201ENST00000517143 103 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.36□□□□□ -2.03
ZIC3O60481 AC144568.1-201ENST00000520139 137 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.36□□□□□ -2.03
ZIC3O60481 AC023442.1-201ENST00000531247 422 ntBASIC2.36□□□□□ -2.03
ZIC3O60481 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.36□□□□□ -2.03
ZIC3O60481 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.36□□□□□ -2.03
ZIC3O60481 AC090616.3-201ENST00000582184 217 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms