Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
KDM1AO60341 PCGEM1.1-201ENST00000613431 131 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 MIR8062-201ENST00000621515 85 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KDM1AO60341 ZNF204P-201ENST00000416749 2397 ntBASIC3.18□□□□□ -1.9
KDM1AO60341 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KDM1AO60341 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KDM1AO60341 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KDM1AO60341 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KDM1AO60341 RNU6-770P-201ENST00000363929 105 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 Y_RNA.193-201ENST00000363979 102 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 Y_RNA.439-201ENST00000384119 94 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 SNORA46.1-201ENST00000391069 153 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 SNORD12B-201ENST00000410433 91 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 RNA5SP120-201ENST00000410900 112 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 RPL23AP58-201ENST00000440453 469 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 AC074050.1-201ENST00000563247 211 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 MIR4659A-201ENST00000580269 81 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 Y_RNA.772-201ENST00000606692 102 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 AC240442.1-201ENST00000616055 283 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 AC073476.4-201ENST00000628409 72 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 AC069528.2-201ENST00000624849 1991 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
KDM1AO60341 AC010329.5-201ENST00000623497 2174 ntBASIC3.17□□□□□ -1.9
KDM1AO60341 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KDM1AO60341 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KDM1AO60341 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KDM1AO60341 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KDM1AO60341 snoU2_19.1-201ENST00000362361 80 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 Y_RNA.19-201ENST00000362462 99 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 U3.9-201ENST00000363823 204 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 Y_RNA.401-201ENST00000383965 117 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 RNU6-245P-201ENST00000384020 107 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 RNVU1-14-201ENST00000384770 164 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 MIR329-1-201ENST00000385028 80 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 MRPL35P1-201ENST00000404272 572 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 MIR320B2-201ENST00000408479 138 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 AC005326.1-201ENST00000429197 123 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 AC103975.1-201ENST00000482506 483 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 AC025465.3-201ENST00000510570 311 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.16□□□□□ -1.9
KDM1AO60341 EIF4A1P12-201ENST00000551910 141 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 MIR5680-201ENST00000577577 84 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.16□□□□□ -1.9
KDM1AO60341 RPL30P11-203ENST00000598995 310 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.16□□□□□ -1.9
KDM1AO60341 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KDM1AO60341 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.15□□□□□ -1.9
KDM1AO60341 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.15□□□□□ -1.9
KDM1AO60341 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.91
KDM1AO60341 RNU6-806P-201ENST00000365147 105 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 RNU6-926P-201ENST00000384075 107 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 MIR549A-201ENST00000385268 96 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 RNA5SP492-201ENST00000411330 114 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 MICF-203ENST00000432679 129 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.15□□□□□ -1.91
KDM1AO60341 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.15□□□□□ -1.91
KDM1AO60341 SNORA25.14-201ENST00000516481 132 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.15□□□□□ -1.91
KDM1AO60341 AC026470.2-201ENST00000561492 181 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 AC010999.1-201ENST00000611856 324 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 AC107871.2-201ENST00000612894 502 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.15□□□□□ -1.91
KDM1AO60341 AC011476.5-201ENST00000615594 130 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 MIR7157-201ENST00000635801 60 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 MIR7515-201ENST00000637837 67 ntBASIC3.15□□□□□ -1.91
KDM1AO60341 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
KDM1AO60341 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KDM1AO60341 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.14□□□□□ -1.91
KDM1AO60341 Y_RNA.26-201ENST00000362539 101 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 Y_RNA.64-201ENST00000362845 102 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 SNORA68.1-201ENST00000364537 132 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 Y_RNA.461-201ENST00000384263 103 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 RNU6-505P-201ENST00000384427 107 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 AL079342.1-201ENST00000401460 267 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 RPL32P35-201ENST00000415214 394 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.14□□□□□ -1.91
KDM1AO60341 UBBP3-201ENST00000445497 241 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 LINC01399-202ENST00000458450 244 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 AC091153.1-201ENST00000466297 402 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 AC023824.2-201ENST00000566185 400 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.14□□□□□ -1.91
KDM1AO60341 SNRPGP20-201ENST00000604477 205 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.14□□□□□ -1.91
KDM1AO60341 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.14□□□□□ -1.91
KDM1AO60341 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KDM1AO60341 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
KDM1AO60341 AC073346.2-201ENST00000624724 2058 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 Y_RNA.105-201ENST00000363182 111 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 Y_RNA.222-201ENST00000364264 102 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 Y_RNA.396-201ENST00000383949 103 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 RNU6-1145P-201ENST00000384246 107 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 MIR29B2-201ENST00000385055 81 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 RNU6-121P-201ENST00000410525 99 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 RNU6-1328P-201ENST00000410938 106 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms