Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC010928.2-201ENST00000588017 287 ntBASIC2.28□□□□□ -2.04
PRKNO60260 7SK.7-201ENST00000603504 247 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AC006157.1-201ENST00000611750 366 ntBASIC2.28□□□□□ -2.04
PRKNO60260 PART1_1.1-201ENST00000611761 217 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AC040896.1-201ENST00000613819 479 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AC007485.1-201ENST00000616755 206 ntBASIC2.28□□□□□ -2.04
PRKNO60260 SNORD98-201ENST00000636377 67 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AL450472.1-202ENST00000637286 180 ntBASIC2.28□□□□□ -2.04
PRKNO60260 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.28□□□□□ -2.04
PRKNO60260 AC135776.4-201ENST00000624300 1904 ntBASIC2.28□□□□□ -2.04
PRKNO60260 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.27□□□□□ -2.05
PRKNO60260 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PRKNO60260 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
PRKNO60260 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PRKNO60260 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.27□□□□□ -2.05
PRKNO60260 Y_RNA.162-201ENST00000363683 102 ntBASIC2.27□□□□□ -2.05
PRKNO60260 RNY3P11-201ENST00000364153 102 ntBASIC2.27□□□□□ -2.05
PRKNO60260 Y_RNA.405-201ENST00000383979 100 ntBASIC2.27□□□□□ -2.05
PRKNO60260 Y_RNA.451-201ENST00000384200 100 ntBASIC2.27□□□□□ -2.05
PRKNO60260 Y_RNA.524-201ENST00000384564 100 ntBASIC2.27□□□□□ -2.05
PRKNO60260 Y_RNA.561-201ENST00000384694 100 ntBASIC2.27□□□□□ -2.05
PRKNO60260 SNORA12.2-201ENST00000391040 156 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
PRKNO60260 RNU6-1328P-201ENST00000410938 106 ntBASIC2.27□□□□□ -2.05
PRKNO60260 RN7SKP284-201ENST00000411002 343 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AC007098.1-201ENST00000420122 367 ntBASIC2.27□□□□□ -2.05
PRKNO60260 MTCYBP10-201ENST00000424905 650 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AC099799.1-201ENST00000439809 192 ntBASIC2.27□□□□□ -2.05
PRKNO60260 snoU13.6-201ENST00000458785 104 ntBASIC2.27□□□□□ -2.05
PRKNO60260 RN7SKP210-201ENST00000459176 261 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AC087477.1-201ENST00000465747 340 ntBASIC2.27□□□□□ -2.05
PRKNO60260 RPL30P10-201ENST00000488148 337 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.27□□□□□ -2.05
PRKNO60260 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.27□□□□□ -2.05
PRKNO60260 RNU7-175P-201ENST00000515915 61 ntBASIC2.27□□□□□ -2.05
PRKNO60260 RNA5SP112-201ENST00000515937 99 ntBASIC2.27□□□□□ -2.05
PRKNO60260 SCARNA11.3-201ENST00000517276 130 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AC109329.1-201ENST00000518744 317 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AC021231.3-201ENST00000558497 370 ntBASIC2.27□□□□□ -2.05
PRKNO60260 MIR5571-201ENST00000577998 113 ntBASIC2.27□□□□□ -2.05
PRKNO60260 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.27□□□□□ -2.05
PRKNO60260 AL078605.1-201ENST00000603529 500 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AC016925.2-201ENST00000605108 242 ntBASIC2.27□□□□□ -2.05
PRKNO60260 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.27□□□□□ -2.05
PRKNO60260 SCARNA4-201ENST00000629045 128 ntBASIC2.27□□□□□ -2.05
PRKNO60260 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.26□□□□□ -2.05
PRKNO60260 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PRKNO60260 Y_RNA.28-201ENST00000362554 111 ntBASIC2.26□□□□□ -2.05
PRKNO60260 RNU6-655P-201ENST00000362858 107 ntBASIC2.26□□□□□ -2.05
PRKNO60260 Y_RNA.202-201ENST00000364083 110 ntBASIC2.26□□□□□ -2.05
PRKNO60260 RNU1-51P-201ENST00000365345 176 ntBASIC2.26□□□□□ -2.05
PRKNO60260 SET-203ENST00000372688 801 ntTSL 2 BASIC2.26□□□□□ -2.05
PRKNO60260 RNY1P14-201ENST00000384426 108 ntBASIC2.26□□□□□ -2.05
PRKNO60260 MIR592-201ENST00000384959 97 ntBASIC2.26□□□□□ -2.05
PRKNO60260 MIR32-201ENST00000384965 70 ntBASIC2.26□□□□□ -2.05
PRKNO60260 MIR218-1-201ENST00000384999 110 ntBASIC2.26□□□□□ -2.05
PRKNO60260 SNORA26.3-201ENST00000391119 136 ntBASIC2.26□□□□□ -2.05
PRKNO60260 CYCSP48-201ENST00000417124 323 ntBASIC2.26□□□□□ -2.05
PRKNO60260 MCFD2P1-201ENST00000417812 300 ntBASIC2.26□□□□□ -2.05
PRKNO60260 AIMP1P2-201ENST00000425294 312 ntBASIC2.26□□□□□ -2.05
PRKNO60260 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.26□□□□□ -2.05
PRKNO60260 AL160004.2-201ENST00000432935 350 ntBASIC2.26□□□□□ -2.05
PRKNO60260 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.26□□□□□ -2.05
PRKNO60260 RPS15AP7-201ENST00000439294 405 ntBASIC2.26□□□□□ -2.05
PRKNO60260 MTND4P19-201ENST00000446659 478 ntBASIC2.26□□□□□ -2.05
PRKNO60260 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.26□□□□□ -2.05
PRKNO60260 snoU13.30-201ENST00000458951 104 ntBASIC2.26□□□□□ -2.05
PRKNO60260 snoU13.14-201ENST00000459372 104 ntBASIC2.26□□□□□ -2.05
PRKNO60260 RNU7-169P-201ENST00000459456 61 ntBASIC2.26□□□□□ -2.05
PRKNO60260 HMGN1P10-201ENST00000474557 553 ntBASIC2.26□□□□□ -2.05
PRKNO60260 AL121594.1-201ENST00000475906 575 ntBASIC2.26□□□□□ -2.05
PRKNO60260 RNU2-53P-201ENST00000516257 147 ntBASIC2.26□□□□□ -2.05
PRKNO60260 RNU6-826P-201ENST00000516827 104 ntBASIC2.26□□□□□ -2.05
PRKNO60260 RNU6-988P-201ENST00000519081 107 ntBASIC2.26□□□□□ -2.05
PRKNO60260 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.26□□□□□ -2.05
PRKNO60260 AC092447.9-201ENST00000603395 144 ntBASIC2.26□□□□□ -2.05
PRKNO60260 Z98751.3-201ENST00000604447 521 ntBASIC2.26□□□□□ -2.05
PRKNO60260 AL355802.3-201ENST00000607571 545 ntBASIC2.26□□□□□ -2.05
PRKNO60260 AC013412.1-201ENST00000610687 192 ntBASIC2.26□□□□□ -2.05
PRKNO60260 AC083806.3-201ENST00000614016 455 ntBASIC2.26□□□□□ -2.05
PRKNO60260 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.26□□□□□ -2.05
PRKNO60260 CTSLP2-204ENST00000629029 392 ntBASIC2.26□□□□□ -2.05
PRKNO60260 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
PRKNO60260 AP000560.1-201ENST00000624150 1937 ntBASIC2.26□□□□□ -2.05
PRKNO60260 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.25□□□□□ -2.05
PRKNO60260 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PRKNO60260 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.25□□□□□ -2.05
PRKNO60260 OR56A5-201ENST00000340110 738 ntBASIC2.25□□□□□ -2.05
PRKNO60260 RNU6-874P-201ENST00000362390 105 ntBASIC2.25□□□□□ -2.05
PRKNO60260 RNU5B-2P-201ENST00000363036 113 ntBASIC2.25□□□□□ -2.05
PRKNO60260 RNU6-486P-201ENST00000363116 107 ntBASIC2.25□□□□□ -2.05
PRKNO60260 Y_RNA.148-201ENST00000363557 117 ntBASIC2.25□□□□□ -2.05
PRKNO60260 RNU6-1210P-201ENST00000363775 107 ntBASIC2.25□□□□□ -2.05
PRKNO60260 MIR625-201ENST00000385047 85 ntBASIC2.25□□□□□ -2.05
PRKNO60260 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.25□□□□□ -2.05
PRKNO60260 EIF4EP4-201ENST00000424916 578 ntBASIC2.25□□□□□ -2.05
PRKNO60260 AC096644.2-201ENST00000429278 159 ntBASIC2.25□□□□□ -2.05
PRKNO60260 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms