Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.32□□□□□ -2.36
PDE6DO43924 AC116347.2-201ENST00000514912 523 ntBASIC0.32□□□□□ -2.36
PDE6DO43924 RNU6-948P-201ENST00000516374 107 ntBASIC0.32□□□□□ -2.36
PDE6DO43924 SNORA26.10-201ENST00000516427 141 ntBASIC0.32□□□□□ -2.36
PDE6DO43924 ZNF519P3-201ENST00000557158 1032 ntBASIC0.32□□□□□ -2.36
PDE6DO43924 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.32□□□□□ -2.36
PDE6DO43924 AL158042.1-201ENST00000605338 460 ntBASIC0.32□□□□□ -2.36
PDE6DO43924 Z99289.3-201ENST00000605586 594 ntBASIC0.32□□□□□ -2.36
PDE6DO43924 AL136221.1-201ENST00000621449 509 ntBASIC0.32□□□□□ -2.36
PDE6DO43924 RNU4-1-201ENST00000363925 141 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 RNU4-76P-201ENST00000364509 141 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 Y_RNA.287-201ENST00000364853 94 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 RNU6-809P-201ENST00000384461 107 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 RNU6-45P-201ENST00000384471 107 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 MIR653-201ENST00000385279 96 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 RNA5SP467-201ENST00000391274 118 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 RNU6-387P-201ENST00000411331 105 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 AC114737.2-201ENST00000421583 173 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 AC092423.1-201ENST00000430165 186 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 AL591806.2-201ENST00000433122 173 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.31□□□□□ -2.36
PDE6DO43924 HMGB1P29-201ENST00000505659 499 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 DEFB131C-201ENST00000528817 165 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.31□□□□□ -2.36
PDE6DO43924 AF131215.7-201ENST00000602443 707 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 AP000484.1-201ENST00000620067 1252 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.31□□□□□ -2.36
PDE6DO43924 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
PDE6DO43924 CASC19-280ENST00000642102 1351 ntBASIC0.31□□□□□ -2.36
PDE6DO43924 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
PDE6DO43924 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
PDE6DO43924 RNU6-1335P-201ENST00000365426 107 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC007283.2-201ENST00000424739 197 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC244023.1-201ENST00000426884 112 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC119618.1-201ENST00000434191 222 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC016717.1-201ENST00000448918 286 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AL163540.1-201ENST00000485382 386 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC034244.1-201ENST00000507687 207 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.3□□□□□ -2.36
PDE6DO43924 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.3□□□□□ -2.36
PDE6DO43924 MIR4781-201ENST00000585250 76 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.3□□□□□ -2.36
PDE6DO43924 BNIP3P40-201ENST00000596017 556 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 BNIP3P19-201ENST00000605397 577 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC104458.1-201ENST00000608243 463 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC008250.2-201ENST00000615261 205 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 MIR8054-201ENST00000620877 86 ntBASIC0.3□□□□□ -2.36
PDE6DO43924 SNORA36A-201ENST00000384221 132 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 RNU6-975P-201ENST00000384296 105 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 SNORD116-13-201ENST00000384408 92 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 Y_RNA.504-201ENST00000384481 104 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 SNORA75.2-201ENST00000391138 150 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 SNORA75.3-201ENST00000391231 150 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 AC090960.1-201ENST00000421072 306 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 AL606662.1-201ENST00000445763 553 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 RPL39P39-201ENST00000455840 151 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 AC008628.2-201ENST00000502605 298 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.29□□□□□ -2.36
PDE6DO43924 AC022217.4-201ENST00000604389 163 ntBASIC0.29□□□□□ -2.36
PDE6DO43924 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.29□□□□□ -2.36
PDE6DO43924 SNORD114-27-201ENST00000363766 70 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
PDE6DO43924 RNU6-17P-201ENST00000384245 107 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 RNU6-18P-201ENST00000384527 107 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 RNU6-1237P-201ENST00000384777 107 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 MIR660-201ENST00000385235 97 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 SNORA12.1-201ENST00000390873 148 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 RNU6-757P-201ENST00000410334 100 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AC010095.1-201ENST00000443543 144 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AC233266.1-201ENST00000454518 96 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.36
PDE6DO43924 AL049830.1-201ENST00000468034 425 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.28□□□□□ -2.36
PDE6DO43924 AC010486.2-201ENST00000505572 483 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AC010587.1-201ENST00000505809 469 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.28□□□□□ -2.36
PDE6DO43924 AC091874.1-201ENST00000511402 339 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 RNU6-1069P-201ENST00000516612 133 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 DEFB108E-201ENST00000524692 240 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AC090049.2-201ENST00000550377 109 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AL391840.1-201ENST00000571144 367 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 Z83818.1-201ENST00000603584 150 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AL360219.1-201ENST00000610230 366 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AC242852.1-201ENST00000612151 96 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AC006001.4-201ENST00000622243 395 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AC244015.1-201ENST00000622301 99 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 AL359697.1-201ENST00000624879 587 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 MTND4P5-201ENST00000435821 1374 ntBASIC0.28□□□□□ -2.36
PDE6DO43924 Y_RNA.22-201ENST00000362492 102 ntBASIC0.27□□□□□ -2.37
PDE6DO43924 RNU6-179P-201ENST00000363350 107 ntBASIC0.27□□□□□ -2.37
PDE6DO43924 Y_RNA.302-201ENST00000364997 102 ntBASIC0.27□□□□□ -2.37
PDE6DO43924 SNORA50A-201ENST00000384225 134 ntBASIC0.27□□□□□ -2.37
PDE6DO43924 SNORD115.1-201ENST00000391109 76 ntBASIC0.27□□□□□ -2.37
PDE6DO43924 AL355796.1-201ENST00000406706 323 ntBASIC0.27□□□□□ -2.37
PDE6DO43924 SNORD99-201ENST00000408612 74 ntBASIC0.27□□□□□ -2.37
PDE6DO43924 AC012306.1-201ENST00000423267 114 ntBASIC0.27□□□□□ -2.37
PDE6DO43924 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms