Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.01□□□□□ -1.93
PRPF3O43395 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.01□□□□□ -1.93
PRPF3O43395 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF3O43395 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.01□□□□□ -1.93
PRPF3O43395 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.01□□□□□ -1.93
PRPF3O43395 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PRPF3O43395 SNORA36A-201ENST00000384221 132 ntBASIC3□□□□□ -1.93
PRPF3O43395 RNU6-17P-201ENST00000384245 107 ntBASIC3□□□□□ -1.93
PRPF3O43395 RNU6-18P-201ENST00000384527 107 ntBASIC3□□□□□ -1.93
PRPF3O43395 Y_RNA.577-201ENST00000384794 101 ntBASIC3□□□□□ -1.93
PRPF3O43395 RN7SKP284-201ENST00000411002 343 ntBASIC3□□□□□ -1.93
PRPF3O43395 RNA5SP184-201ENST00000411071 108 ntBASIC3□□□□□ -1.93
PRPF3O43395 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3□□□□□ -1.93
PRPF3O43395 AC099799.1-201ENST00000439809 192 ntBASIC3□□□□□ -1.93
PRPF3O43395 RNU6-470P-201ENST00000515954 104 ntBASIC3□□□□□ -1.93
PRPF3O43395 RNU6-120P-201ENST00000516077 103 ntBASIC3□□□□□ -1.93
PRPF3O43395 Y_RNA.701-201ENST00000516812 110 ntBASIC3□□□□□ -1.93
PRPF3O43395 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3□□□□□ -1.93
PRPF3O43395 RPL12P50-201ENST00000603116 116 ntBASIC3□□□□□ -1.93
PRPF3O43395 AC006023.1-201ENST00000603944 259 ntBASIC3□□□□□ -1.93
PRPF3O43395 SNRPGP20-201ENST00000604477 205 ntBASIC3□□□□□ -1.93
PRPF3O43395 AL080274.1-201ENST00000605565 220 ntBASIC3□□□□□ -1.93
PRPF3O43395 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PRPF3O43395 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PRPF3O43395 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF3O43395 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF3O43395 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PRPF3O43395 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.99□□□□□ -1.93
PRPF3O43395 SNORD32B-201ENST00000364460 84 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RNU6-546P-201ENST00000383991 107 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RNU6-245P-201ENST00000384020 107 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RNU6-1274P-201ENST00000384557 107 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RNA5SP210-201ENST00000391034 120 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 SNORA12.2-201ENST00000391040 156 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RPL21P75-201ENST00000396599 483 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RPL21P28-201ENST00000401418 483 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 Y_RNA.597-201ENST00000410463 100 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 MTCO2P12-201ENST00000427426 682 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF3O43395 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.99□□□□□ -1.93
PRPF3O43395 AL109933.2-201ENST00000452651 260 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RPL21P39-201ENST00000463605 483 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 AC090515.1-201ENST00000465295 476 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RN7SL429P-201ENST00000479090 223 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 AC087190.1-201ENST00000484462 480 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RN7SL489P-201ENST00000486185 223 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RN7SL327P-201ENST00000488659 223 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 AC093591.1-201ENST00000491435 481 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 RPL21P16-201ENST00000495531 483 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 MIR2355-201ENST00000517199 87 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF3O43395 AC022616.8-201ENST00000533569 253 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PRPF3O43395 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PRPF3O43395 AC044792.1-201ENST00000593294 196 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PRPF3O43395 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.99□□□□□ -1.93
PRPF3O43395 RN7SL853P-201ENST00000617250 223 ntBASIC2.99□□□□□ -1.93
PRPF3O43395 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
PRPF3O43395 MIR369-201ENST00000362155 70 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 Y_RNA.197-201ENST00000364004 102 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 MIR592-201ENST00000384959 97 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 MIR559-201ENST00000385188 96 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 RNU6-1093P-201ENST00000391194 107 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 AL139095.1-201ENST00000404326 391 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 ARL5AP4-201ENST00000430731 512 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 AC007677.1-201ENST00000445757 515 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF3O43395 RNU7-4P-201ENST00000516961 62 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF3O43395 AC023442.1-201ENST00000531247 422 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 AC243829.7-201ENST00000633081 225 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 BX322639.1-202ENST00000423987 2213 ntBASIC2.98□□□□□ -1.93
PRPF3O43395 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PRPF3O43395 MAPK10-266ENST00000641066 6555 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
PRPF3O43395 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.97□□□□□ -1.93
PRPF3O43395 RNU6-280P-201ENST00000364145 104 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 RNA5SP125-201ENST00000364843 120 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 SNORD42.2-201ENST00000365570 69 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 RNU6-26P-201ENST00000383985 107 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 RNU6-301P-201ENST00000384277 107 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 MIR625-201ENST00000385047 85 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 AC009238.1-201ENST00000442165 424 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 AC009237.6-201ENST00000446969 424 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 Y_RNA.639-201ENST00000458981 102 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 RPS27AP9-201ENST00000477681 438 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.97□□□□□ -1.93
PRPF3O43395 RNU6-976P-201ENST00000516086 111 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 RNU6-1153P-201ENST00000516760 105 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 ELOCP31-201ENST00000540463 467 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.97□□□□□ -1.93
PRPF3O43395 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PRPF3O43395 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
PRPF3O43395 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PRPF3O43395 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRPF3O43395 RNU6-1115P-201ENST00000362490 106 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 RNU1-109P-201ENST00000383960 147 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 RNU6-541P-201ENST00000384709 110 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms