Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC012414.6-201ENST00000568241 401 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AC090517.1-201ENST00000569307 266 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AC009994.1-201ENST00000606889 253 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AL603755.1-201ENST00000619504 163 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AL136221.1-201ENST00000621449 509 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLOCKO15516 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.27□□□□□ -2.21
CLOCKO15516 ICE2P2-201ENST00000483823 2787 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 MIR302D-201ENST00000362275 68 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 RNU6-862P-201ENST00000362804 105 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 RNY1P10-201ENST00000363268 113 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 Y_RNA.255-201ENST00000364581 97 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 SNORD1A-201ENST00000364968 72 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 Y_RNA.327-201ENST00000365201 102 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 SNORA36A-201ENST00000384221 132 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 MIR208B-201ENST00000401172 77 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 RNU2-7P-201ENST00000410794 178 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.27□□□□□ -2.21
CLOCKO15516 RPL30P13-201ENST00000418873 348 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 AC012306.1-201ENST00000423267 114 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 AC245047.4-201ENST00000433189 144 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.27□□□□□ -2.21
CLOCKO15516 SNRPFP3-201ENST00000457792 225 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 AC010531.2-201ENST00000465012 153 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.27□□□□□ -2.21
CLOCKO15516 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.27□□□□□ -2.21
CLOCKO15516 SNORA43.4-201ENST00000629559 138 ntBASIC1.27□□□□□ -2.21
CLOCKO15516 AL390237.1-201ENST00000404226 1415 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 Y_RNA.132-201ENST00000363421 102 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 Y_RNA.201-201ENST00000364052 96 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 RNU6-1019P-201ENST00000364424 107 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 RNU2-9P-201ENST00000410194 145 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 ARL5AP1-201ENST00000418991 388 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.26□□□□□ -2.21
CLOCKO15516 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.26□□□□□ -2.21
CLOCKO15516 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.26□□□□□ -2.21
CLOCKO15516 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 AC244505.5-201ENST00000443639 207 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 AL356010.1-201ENST00000456364 102 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.26□□□□□ -2.21
CLOCKO15516 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.26□□□□□ -2.21
CLOCKO15516 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.26□□□□□ -2.21
CLOCKO15516 RNA5SP481-201ENST00000516814 122 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 RNA5SP437-201ENST00000517249 129 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.26□□□□□ -2.21
CLOCKO15516 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 AC025449.1-201ENST00000603896 529 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 RNU6-85P-201ENST00000605989 107 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 U2.17-201ENST00000611454 95 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 AC072046.2-201ENST00000618366 268 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 MIR8063-201ENST00000621930 81 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.26□□□□□ -2.21
CLOCKO15516 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.26□□□□□ -2.21
CLOCKO15516 AC091812.1-201ENST00000432235 1948 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 AC100821.1-201ENST00000523153 2479 ntBASIC1.26□□□□□ -2.21
CLOCKO15516 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
CLOCKO15516 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.25□□□□□ -2.21
CLOCKO15516 RNU6-1120P-201ENST00000362988 108 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 RNU6-203P-201ENST00000384038 104 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 RNU6-903P-201ENST00000391270 109 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 AL445567.1-201ENST00000439121 144 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 MTCO2P3-201ENST00000442543 421 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 AC132479.1-201ENST00000449160 144 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.25□□□□□ -2.21
CLOCKO15516 snoU13.30-201ENST00000458951 104 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.25□□□□□ -2.21
CLOCKO15516 AC108078.1-201ENST00000508073 725 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.25□□□□□ -2.21
CLOCKO15516 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.25□□□□□ -2.21
CLOCKO15516 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.25□□□□□ -2.21
CLOCKO15516 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.25□□□□□ -2.21
CLOCKO15516 AC084364.2-201ENST00000546924 395 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 SUB1P2-201ENST00000556401 297 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 AP005136.1-201ENST00000579765 429 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.25□□□□□ -2.21
CLOCKO15516 AL121890.5-201ENST00000620848 304 ntBASIC1.25□□□□□ -2.21
CLOCKO15516 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLOCKO15516 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLOCKO15516 SNORD33-201ENST00000362761 85 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 SNORA63D-201ENST00000364359 132 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.24□□□□□ -2.21
CLOCKO15516 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.24□□□□□ -2.21
CLOCKO15516 MTND4P32-201ENST00000437189 1237 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.24□□□□□ -2.21
CLOCKO15516 C1DP4-201ENST00000455429 424 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 HMGN2P9-201ENST00000476875 229 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 AL163973.1-201ENST00000484753 577 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 AC079140.2-201ENST00000506193 142 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.24□□□□□ -2.21
CLOCKO15516 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.24□□□□□ -2.21
CLOCKO15516 AC005668.1-201ENST00000571142 476 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 AC068790.2-201ENST00000602601 557 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 Z94722.1-201ENST00000604328 474 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 AL050343.2-201ENST00000607338 280 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 AC091931.1-201ENST00000623488 728 ntBASIC1.24□□□□□ -2.21
CLOCKO15516 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms