Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 RPL23AP50-201ENST00000434149 455 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 RNU7-59P-201ENST00000459101 61 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 RPS26P42-201ENST00000413485 326 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 AC027644.1-201ENST00000419595 298 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 AL353777.1-201ENST00000425552 326 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 TPTE2P1-204ENST00000435256 593 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 STAG3L5P-204ENST00000443759 179 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD1O14646 MTND4P19-201ENST00000446659 478 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD1O14646 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD1O14646 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 AC027338.1-201ENST00000514840 825 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD1O14646 AL355816.2-201ENST00000610049 647 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 AL353149.1-201ENST00000610667 244 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 AC011155.2-201ENST00000623202 216 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.3□□□□□ -2.46
CHD1O14646 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
CHD1O14646 MIR103A2-201ENST00000362154 78 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 RNU6-839P-201ENST00000363347 108 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 MIR644A-201ENST00000385262 94 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 MIR643-201ENST00000385267 97 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 MTND4P24-201ENST00000424002 397 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 COX7BP2-201ENST00000437976 242 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 AC090049.2-201ENST00000550377 109 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.31□□□□□ -2.46
CHD1O14646 AC005332.6-201ENST00000613178 446 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 AP000943.4-201ENST00000622912 357 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 AC099654.9-201ENST00000637055 678 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 MIR1322-201ENST00000638013 71 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 AC132825.7-201ENST00000638744 335 ntBASIC-0.31□□□□□ -2.46
CHD1O14646 MIR140-201ENST00000385282 100 ntBASIC-0.32□□□□□ -2.46
CHD1O14646 ELOCP24-201ENST00000456370 334 ntBASIC-0.32□□□□□ -2.46
CHD1O14646 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.32□□□□□ -2.46
CHD1O14646 AC074198.2-201ENST00000508153 258 ntBASIC-0.32□□□□□ -2.46
CHD1O14646 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
CHD1O14646 AC104985.3-201ENST00000623479 597 ntBASIC-0.32□□□□□ -2.46
CHD1O14646 AC107982.1-201ENST00000507171 1300 ntBASIC-0.32□□□□□ -2.46
CHD1O14646 AC092268.1-201ENST00000342691 405 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
CHD1O14646 AL356583.2-201ENST00000426536 280 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.33□□□□□ -2.46
CHD1O14646 LINC01399-202ENST00000458450 244 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC104629.1-201ENST00000494226 508 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC091860.1-201ENST00000505723 432 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 RNU6-922P-201ENST00000516753 99 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC007751.1-201ENST00000529260 376 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.33□□□□□ -2.46
CHD1O14646 AC092325.1-201ENST00000566449 554 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC004987.4-201ENST00000603383 338 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC106754.2-201ENST00000623006 233 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 MIR340-201ENST00000362125 95 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 MIR301A-201ENST00000385261 86 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 SNORD105-201ENST00000386910 85 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 SNORD65C-201ENST00000390962 71 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 SNORA12-201ENST00000391162 147 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC073261.1-201ENST00000429409 121 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.33□□□□□ -2.46
CHD1O14646 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.33□□□□□ -2.46
CHD1O14646 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC091163.3-201ENST00000518269 1144 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.33□□□□□ -2.46
CHD1O14646 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.33□□□□□ -2.46
CHD1O14646 AP002001.1-203ENST00000534002 267 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC009712.1-201ENST00000564938 316 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 AC104408.1-201ENST00000605241 170 ntBASIC-0.33□□□□□ -2.46
CHD1O14646 SNORD115-41-201ENST00000363608 82 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 SNORA4.2-201ENST00000365313 147 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 AL162725.1-201ENST00000435405 301 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 MTCO1P19-201ENST00000443487 500 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 RNU7-34P-201ENST00000459394 64 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 AP000797.1-201ENST00000478870 387 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.34□□□□□ -2.46
CHD1O14646 AC023538.1-201ENST00000534576 736 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 MIR1273C-201ENST00000578669 77 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 AL592221.1-201ENST00000605266 382 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 AC018889.1-201ENST00000605372 397 ntBASIC-0.34□□□□□ -2.46
CHD1O14646 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
CHD1O14646 AC016831.2-201ENST00000417179 352 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AL365338.1-201ENST00000422282 858 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.35□□□□□ -2.47
CHD1O14646 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 SUB1P2-201ENST00000556401 297 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AC064807.4-201ENST00000607201 407 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AL356094.1-201ENST00000624663 1212 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AL079343.1-201ENST00000572358 1771 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 RNY1P8-201ENST00000383970 114 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 RNU6-815P-201ENST00000384080 113 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AL451046.2-201ENST00000403074 277 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms