Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SNORA31.25-201ENST00000517242 134 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 EIF4A1P12-201ENST00000551910 141 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN4O14493 AC026464.5-201ENST00000562497 722 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN4O14493 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN4O14493 AC019193.3-201ENST00000609144 554 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN4O14493 MTND4P5-201ENST00000435821 1374 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN4O14493 RNU6-784P-201ENST00000384330 106 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 RNU6-306P-201ENST00000384617 107 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 RNU6-1093P-201ENST00000391194 107 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 RNA5SP494-201ENST00000410653 129 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 AC018634.1-201ENST00000437554 401 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 DAP3P1-201ENST00000441522 278 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.09□□□□□ -2.07
CLDN4O14493 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.09□□□□□ -2.07
CLDN4O14493 AC132942.1-201ENST00000486753 483 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 AC018710.1-201ENST00000506509 158 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN4O14493 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.09□□□□□ -2.07
CLDN4O14493 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.09□□□□□ -2.07
CLDN4O14493 FGF7P1-201ENST00000582820 288 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 POLR3GP2-201ENST00000588366 668 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 AC124303.1-201ENST00000605703 360 ntBASIC2.09□□□□□ -2.07
CLDN4O14493 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CLDN4O14493 RNU6-234P-201ENST00000365229 104 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 AL356776.1-201ENST00000406574 447 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 SRIP3-201ENST00000413200 219 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN4O14493 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN4O14493 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN4O14493 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN4O14493 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.08□□□□□ -2.08
CLDN4O14493 AC093259.1-201ENST00000509755 300 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN4O14493 RNU6-566P-201ENST00000516790 107 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 RNA5SP454-201ENST00000517231 127 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 AP005639.2-201ENST00000527592 928 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN4O14493 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.08□□□□□ -2.08
CLDN4O14493 AC009994.1-201ENST00000606889 253 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN4O14493 AC005520.5-201ENST00000613926 164 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CLDN4O14493 ZNF72P-201ENST00000425869 1908 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN4O14493 AC233981.2-201ENST00000611524 1614 ntBASIC2.08□□□□□ -2.08
CLDN4O14493 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CLDN4O14493 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN4O14493 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN4O14493 RNU5B-2P-201ENST00000363036 113 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 Y_RNA.301-201ENST00000364990 103 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 SNORD14D-201ENST00000384390 87 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 MIR518A2-201ENST00000384966 87 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 RNU6-510P-201ENST00000391239 108 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 AL357139.1-201ENST00000407792 426 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 SNORA11.4-201ENST00000408823 129 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 RNU2-41P-201ENST00000410991 178 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 HMGN2P3-201ENST00000433603 273 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 HMGN2P5-201ENST00000436882 273 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 AL603825.1-201ENST00000438481 80 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN4O14493 MTCO2P30-201ENST00000503662 364 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 AC005741.1-201ENST00000511094 432 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 ACA59.1-201ENST00000515966 143 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 Y_RNA.676-201ENST00000516393 96 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 RNU6-548P-201ENST00000517083 115 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 RNA5SP490-201ENST00000517141 136 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN4O14493 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN4O14493 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN4O14493 AC090517.1-201ENST00000569307 266 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 MIR4529-201ENST00000578110 78 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.07□□□□□ -2.08
CLDN4O14493 KPNA2P1-201ENST00000458289 1591 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 SNORD114-1-201ENST00000362705 72 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 SNORD50.1-201ENST00000362987 71 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 SNORA16B-201ENST00000364674 135 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 MIR764-201ENST00000390811 85 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 MTND1P2-201ENST00000430604 821 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN4O14493 AC245102.2-201ENST00000448956 180 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 PPP1R2P5-201ENST00000457256 603 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 RNU6-329P-201ENST00000459618 107 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 AC055731.1-201ENST00000474387 401 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 AF186996.7-201ENST00000492781 209 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN4O14493 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN4O14493 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms