Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL162395.1-201ENST00000457882 422 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 RPS26P45-201ENST00000471748 340 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.56□□□□□ -2.32
SDCBPO00560 AC067942.3-201ENST00000512025 362 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SDCBPO00560 PSMC1P5-201ENST00000512850 177 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 RNU6-1178P-201ENST00000516674 107 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 SUMO2P16-201ENST00000519475 264 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.56□□□□□ -2.32
SDCBPO00560 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.56□□□□□ -2.32
SDCBPO00560 AC004817.2-201ENST00000561794 651 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.56□□□□□ -2.32
SDCBPO00560 MIR4781-201ENST00000585250 76 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 AC005771.1-201ENST00000585581 349 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 AC027807.2-201ENST00000616099 408 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 AC011155.2-201ENST00000623202 216 ntBASIC0.56□□□□□ -2.32
SDCBPO00560 BX322639.1-202ENST00000423987 2213 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 RNU6-501P-201ENST00000364072 100 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 RNU1-93P-201ENST00000364704 169 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 RNU6-1026P-201ENST00000384465 108 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 Y_RNA.504-201ENST00000384481 104 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 MIR19B1-201ENST00000384829 87 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 MRPL42P2-201ENST00000403169 426 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 AL008987.1-201ENST00000415528 237 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 AC104850.1-201ENST00000435940 476 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 RNU7-34P-201ENST00000459394 64 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.55□□□□□ -2.32
SDCBPO00560 AC104136.1-201ENST00000512969 394 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.55□□□□□ -2.32
SDCBPO00560 LRRC34P2-201ENST00000514850 553 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.55□□□□□ -2.32
SDCBPO00560 AC103996.1-201ENST00000555468 102 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.55□□□□□ -2.32
SDCBPO00560 CYP4A27P-201ENST00000567218 190 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.55□□□□□ -2.32
SDCBPO00560 AL359999.1-201ENST00000604513 294 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 AC091304.9-201ENST00000612091 226 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 AC021506.2-201ENST00000612354 169 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.55□□□□□ -2.32
SDCBPO00560 AC009541.1-201ENST00000438279 2662 ntBASIC0.55□□□□□ -2.32
SDCBPO00560 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
SDCBPO00560 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SDCBPO00560 AC092268.1-201ENST00000342691 405 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 RNU4-56P-201ENST00000364700 142 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 Y_RNA.367-201ENST00000365544 101 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 RNU6-17P-201ENST00000384245 107 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 RNU6-18P-201ENST00000384527 107 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 MIR508-201ENST00000384857 115 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 RNA5SP109-201ENST00000391010 116 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 RNU2-8P-201ENST00000410727 190 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 MTCO2P23-201ENST00000425216 680 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.54□□□□□ -2.32
SDCBPO00560 AC069257.2-201ENST00000441819 155 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 EPS15P1-201ENST00000448836 336 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AC016717.1-201ENST00000448918 286 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.54□□□□□ -2.32
SDCBPO00560 RPS23P5-201ENST00000495419 428 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.54□□□□□ -2.32
SDCBPO00560 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.54□□□□□ -2.32
SDCBPO00560 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.54□□□□□ -2.32
SDCBPO00560 RNU6-197P-201ENST00000516680 100 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 SNORA70.22-201ENST00000517160 124 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AC090572.1-201ENST00000519251 160 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.54□□□□□ -2.32
SDCBPO00560 DEFB108E-201ENST00000524692 240 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SDCBPO00560 MTND4P33-201ENST00000556706 766 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.54□□□□□ -2.32
SDCBPO00560 AC133485.1-201ENST00000567176 124 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AC138907.6-201ENST00000568401 126 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 MIR5695-201ENST00000579717 85 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 FAM106DP-201ENST00000586416 501 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AL929325.1-201ENST00000603096 117 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AC136443.5-201ENST00000603741 370 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.54□□□□□ -2.32
SDCBPO00560 AC005520.5-201ENST00000613926 164 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 AC009878.1-201ENST00000621819 340 ntBASIC0.54□□□□□ -2.32
SDCBPO00560 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
SDCBPO00560 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SDCBPO00560 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.53□□□□□ -2.32
SDCBPO00560 RNU6-1123P-201ENST00000362347 106 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 SNORD113-6-201ENST00000363345 75 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 Y_RNA.132-201ENST00000363421 102 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 Y_RNA.363-201ENST00000365529 113 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 RNU6-827P-201ENST00000365553 106 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 SNORA20.2-201ENST00000383922 131 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 MIR605-201ENST00000385078 83 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 RNU6-910P-201ENST00000390844 107 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 SNORA12.1-201ENST00000390873 148 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 RPL21P1-201ENST00000399532 476 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 MIR208B-201ENST00000401172 77 ntBASIC0.53□□□□□ -2.32
SDCBPO00560 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.53□□□□□ -2.32
SDCBPO00560 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
SDCBPO00560 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms