Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MIR3616-201ENST00000584070 92 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 AL713866.2-201ENST00000603579 219 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 AL078596.1-201ENST00000624856 447 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.93□□□□□ -1.94
FOXN3O00409 AC093010.3-201ENST00000570269 15214 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
FOXN3O00409 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
FOXN3O00409 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
FOXN3O00409 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXN3O00409 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXN3O00409 RNU6-196P-201ENST00000384315 107 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 RNU6-505P-201ENST00000384427 107 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 MIR32-201ENST00000384965 70 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 MIR634-201ENST00000385208 97 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 Y_RNA.645-201ENST00000391229 102 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 HMGB3P2-201ENST00000411913 584 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 AL358453.1-201ENST00000422522 250 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXN3O00409 AC012306.1-201ENST00000423267 114 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 MTCO3P29-201ENST00000432119 779 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.92□□□□□ -1.94
FOXN3O00409 RPL39P40-201ENST00000445481 146 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXN3O00409 TOMM22P6-201ENST00000465035 409 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 RN7SL297P-201ENST00000483161 293 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.92□□□□□ -1.94
FOXN3O00409 RNU6-586P-201ENST00000517265 104 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 HSPE1P18-201ENST00000517602 280 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.92□□□□□ -1.94
FOXN3O00409 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
FOXN3O00409 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXN3O00409 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
FOXN3O00409 AL132822.1-201ENST00000617063 513 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 MIR5739-201ENST00000619803 80 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 7SK.10-201ENST00000621414 298 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 MIR6733-201ENST00000635723 61 ntBASIC2.92□□□□□ -1.94
FOXN3O00409 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXN3O00409 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXN3O00409 RNU4-9P-201ENST00000364951 139 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 Y_RNA.389-201ENST00000383924 113 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 RNU6-463P-201ENST00000384340 107 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 SNORA12-201ENST00000391162 147 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 RNU6-1093P-201ENST00000391194 107 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 AC092423.1-201ENST00000430165 186 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXN3O00409 CHEK2P4-201ENST00000450340 246 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 SNORA59A-201ENST00000459326 152 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 RNU7-169P-201ENST00000459456 61 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 RNU6-567P-201ENST00000516746 107 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 AL590705.4-201ENST00000532209 134 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 AL117187.1-201ENST00000555482 181 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 MIR5571-201ENST00000577998 113 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 MIR5194-201ENST00000582634 120 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 AC104695.3-201ENST00000604052 296 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 SNORD58B-201ENST00000607313 66 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 MIR1244-1-201ENST00000612829 85 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 MIR1244-3-201ENST00000635744 85 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 MIR1244-2-201ENST00000636449 85 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 MIR1244-4-202ENST00000636813 85 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXN3O00409 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.91□□□□□ -1.94
FOXN3O00409 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.9□□□□□ -1.94
FOXN3O00409 AC005592.1-201ENST00000566527 1640 ntBASIC2.9□□□□□ -1.94
FOXN3O00409 RNU4-15P-201ENST00000362613 141 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 RNU6-238P-201ENST00000363313 106 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 RNA5SP393-201ENST00000363423 117 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 RNU6-595P-201ENST00000363944 107 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 RNA5SP125-201ENST00000364843 120 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 AC117470.1-201ENST00000381974 330 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 Y_RNA.405-201ENST00000383979 100 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 Y_RNA.451-201ENST00000384200 100 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 RNU6-1274P-201ENST00000384557 107 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 Y_RNA.524-201ENST00000384564 100 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 Y_RNA.561-201ENST00000384694 100 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 MIR487A-201ENST00000385009 80 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 MIR549A-201ENST00000385268 96 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 SNORA11.2-201ENST00000408318 127 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 RNU2-63P-201ENST00000410792 194 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 DPH3P2-201ENST00000422618 250 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 AC087499.2-201ENST00000432861 149 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.9□□□□□ -1.95
FOXN3O00409 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.9□□□□□ -1.95
FOXN3O00409 AC104389.3-201ENST00000445629 235 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 OR2AQ1P-201ENST00000451972 200 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.9□□□□□ -1.95
FOXN3O00409 RPS3P1-201ENST00000456781 192 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 RNU4-77P-201ENST00000516692 156 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 AC109329.2-201ENST00000519658 482 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
FOXN3O00409 HSBP1P1-201ENST00000555205 166 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 MIR4503-201ENST00000582187 83 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 AC010928.2-201ENST00000588017 287 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 AL138963.2-201ENST00000605137 226 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 AC069528.2-201ENST00000624849 1991 ntBASIC2.9□□□□□ -1.95
FOXN3O00409 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.9□□□□□ -1.95
FOXN3O00409 RNU6-1159P-201ENST00000362933 107 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 RNU5B-2P-201ENST00000363036 113 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 Y_RNA.111-201ENST00000363248 100 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms