Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC188H7C350 MIR514B-201ENST00000516774 80 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 MTND1P5-201ENST00000517906 940 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC188H7C350 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCDC188H7C350 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC188H7C350 AC016256.1-201ENST00000547971 354 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 POLR3GP2-201ENST00000588366 668 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 AC023043.2-201ENST00000589678 1026 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 AC243960.4-201ENST00000600532 288 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 AC104458.1-201ENST00000608243 463 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC188H7C350 AC090517.2-201ENST00000614966 680 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 AC009033.1-201ENST00000624279 431 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC188H7C350 AL450472.1-202ENST00000637286 180 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC188H7C350 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC188H7C350 RNU1-58P-201ENST00000362413 163 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 RNU6-534P-201ENST00000364877 106 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 SNORA29-201ENST00000384183 140 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 AL512604.1-201ENST00000404812 257 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 RNU2-41P-201ENST00000410991 178 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 ZNF885P-201ENST00000420174 1098 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 HMGN2P3-201ENST00000433603 273 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 HMGN2P5-201ENST00000436882 273 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC188H7C350 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC188H7C350 Y_RNA.638-201ENST00000459374 113 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 MTCYBP18-201ENST00000501056 747 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC188H7C350 AC068790.6-201ENST00000602558 258 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CCDC188H7C350 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.03□□□□□ -2.08
CCDC188H7C350 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 MIR6873-201ENST00000622788 63 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 MIR3688-2-201ENST00000636963 87 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 AC073869.6-201ENST00000640656 341 ntBASIC2.03□□□□□ -2.08
CCDC188H7C350 KPNA2P1-201ENST00000458289 1591 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 Y_RNA.151-201ENST00000363566 112 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 Y_RNA.157-201ENST00000363638 102 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 RNU6-1286P-201ENST00000383871 107 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 SNORA3.2-201ENST00000408221 125 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 RNA5SP118-201ENST00000410385 109 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 RNU4-53P-201ENST00000410828 140 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 AL135786.1-201ENST00000415892 214 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 AL590632.1-201ENST00000424289 371 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 HMGN2P19-201ENST00000425149 265 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 USP9YP28-201ENST00000435142 589 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 MTND4LP16-201ENST00000440828 295 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 SNRPEP8-201ENST00000442866 260 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 RPL23AP6-201ENST00000446637 472 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 AC130509.1-201ENST00000464158 433 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC188H7C350 FAM206BP-201ENST00000510179 541 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC188H7C350 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC188H7C350 AL158827.2-201ENST00000602494 330 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 AP003465.2-201ENST00000602571 373 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 AL691447.3-201ENST00000635020 330 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CCDC188H7C350 AC068137.4-201ENST00000638485 296 ntBASIC2.02□□□□□ -2.09
CCDC188H7C350 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC188H7C350 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 AC008555.8-201ENST00000623602 2168 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 SNORA18.2-201ENST00000383865 132 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 RNU6-1013P-201ENST00000384180 107 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 MIR517A-201ENST00000385001 87 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 AC096920.1-201ENST00000423991 241 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 UBE2V1P8-201ENST00000437166 265 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC188H7C350 snoU13.23-201ENST00000458863 104 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 RPS23P5-201ENST00000495419 428 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 ACA59.1-201ENST00000515966 143 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 RNU6-1098P-201ENST00000516772 96 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC188H7C350 MRPS36P4-201ENST00000534436 298 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC188H7C350 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC188H7C350 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC188H7C350 AC009994.1-201ENST00000606889 253 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 AL133215.3-201ENST00000609801 448 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 Y_RNA.783-201ENST00000613546 102 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 AL162373.1-201ENST00000620433 407 ntBASIC2.01□□□□□ -2.09
CCDC188H7C350 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC188H7C350 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC188H7C350 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2□□□□□ -2.09
CCDC188H7C350 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2□□□□□ -2.09
CCDC188H7C350 AL645568.3-201ENST00000433683 316 ntBASIC2□□□□□ -2.09
CCDC188H7C350 AL353689.1-201ENST00000438895 199 ntBASIC2□□□□□ -2.09
CCDC188H7C350 RNU6-1314P-201ENST00000517139 104 ntBASIC2□□□□□ -2.09
CCDC188H7C350 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2□□□□□ -2.09
CCDC188H7C350 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2□□□□□ -2.09
CCDC188H7C350 FGF7P1-201ENST00000582820 288 ntBASIC2□□□□□ -2.09
CCDC188H7C350 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2□□□□□ -2.09
CCDC188H7C350 AC019193.3-201ENST00000609144 554 ntBASIC2□□□□□ -2.09
CCDC188H7C350 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2□□□□□ -2.09
CCDC188H7C350 AL590240.4-201ENST00000616908 390 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms