Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC116165.2-201ENST00000616705 206 ntBASIC-0.48□□□□□ -2.49
COL6A5A8TX70 MIR101-2-201ENST00000362195 79 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 MT-TY-201ENST00000387409 66 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 MIR1290-201ENST00000408735 78 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.49□□□□□ -2.49
COL6A5A8TX70 AL392003.1-201ENST00000434394 243 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 FCF1P4-201ENST00000448326 183 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 POLR3GP2-201ENST00000588366 668 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 MIR6502-201ENST00000617296 76 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 MIR18A-201ENST00000362310 71 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 MTCO2P34-201ENST00000421994 607 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 AL356583.2-201ENST00000426536 280 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.49□□□□□ -2.49
COL6A5A8TX70 MTCO2P18-201ENST00000457151 658 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 MTCO2P15-201ENST00000532655 656 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 AC009032.1-201ENST00000617574 431 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 SEC63P2-201ENST00000503863 1939 ntBASIC-0.49□□□□□ -2.49
COL6A5A8TX70 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
COL6A5A8TX70 RNU6-432P-201ENST00000384196 109 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 RNU2-48P-201ENST00000410694 191 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.5□□□□□ -2.49
COL6A5A8TX70 U7.7-201ENST00000459276 60 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC079382.1-201ENST00000493346 557 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC010424.1-201ENST00000506336 297 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC010460.2-201ENST00000509054 677 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 RNU6-917P-201ENST00000516294 104 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 RNU6-881P-201ENST00000516813 102 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
COL6A5A8TX70 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 MTND1P15-201ENST00000579262 949 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC092104.1-201ENST00000497346 1441 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
COL6A5A8TX70 MIR507-201ENST00000385234 94 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AL031779.1-201ENST00000415663 330 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AL035398.1-201ENST00000430869 322 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.5□□□□□ -2.49
COL6A5A8TX70 RPL36AP48-201ENST00000485521 314 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 RNU2-60P-201ENST00000517290 128 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 DEFB108D-201ENST00000527787 222 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC013468.1-201ENST00000608680 598 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC063944.3-201ENST00000609969 533 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC011939.3-201ENST00000613686 466 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 AC005562.2-201ENST00000618264 111 ntBASIC-0.5□□□□□ -2.49
COL6A5A8TX70 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 SNORD115-28-201ENST00000363931 81 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 MIR760-201ENST00000390220 80 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 MIR8485-201ENST00000401372 91 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 RNU6-759P-201ENST00000516740 103 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 RNA5SP268-201ENST00000516828 124 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AC090897.1-201ENST00000580909 226 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 CASC19-280ENST00000642102 1351 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 RNU6-428P-201ENST00000362942 107 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AC127391.1-201ENST00000411737 98 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 MTATP6P16-201ENST00000434543 526 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 YWHAZP8-201ENST00000436935 731 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 RNA5SP484-201ENST00000458857 111 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 SNORA25.11-201ENST00000515935 105 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AP000942.4-201ENST00000604811 241 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AC245008.1-201ENST00000608123 476 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 RNU6-553P-201ENST00000364047 96 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 RNU1-39P-201ENST00000383897 165 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AC098831.1-201ENST00000440661 216 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 USP9YP25-201ENST00000457708 443 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AC140658.3-201ENST00000567603 271 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 MIR4263-201ENST00000584745 83 ntBASIC-0.51□□□□□ -2.49
COL6A5A8TX70 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.51□□□□□ -2.49
COL6A5A8TX70 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
COL6A5A8TX70 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 AL663109.1-201ENST00000411498 844 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 RNU6-897P-201ENST00000517135 105 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms