Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC104850.1-201ENST00000435940 476 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNU7-138P-201ENST00000459479 64 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RPL9P9-202ENST00000466501 579 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC011005.2-201ENST00000487324 359 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNU6-1178P-201ENST00000516674 107 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC109446.1-201ENST00000566172 220 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RSL24D1P11-201ENST00000591045 491 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AL360219.1-201ENST00000610230 366 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC104073.3-201ENST00000610942 955 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AL132822.1-201ENST00000617063 513 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 U4atac.1-201ENST00000618345 95 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC097372.5-201ENST00000623665 376 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 MTND5P17-201ENST00000418405 1603 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.518-201ENST00000384552 113 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNU6-160P-201ENST00000384591 107 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNU6-1179P-201ENST00000384667 107 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.553-201ENST00000384670 102 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.597-201ENST00000410463 100 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RPS15AP10-201ENST00000432472 382 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 MTCO2P3-201ENST00000442543 421 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 USP9YP12-201ENST00000450481 570 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC098826.2-201ENST00000452011 651 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC087884.1-201ENST00000469738 328 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC005178.1-201ENST00000508392 440 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 SNORA19.2-201ENST00000516013 114 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNU1-86P-201ENST00000516108 154 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 SNORA14.1-201ENST00000516113 141 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNU1-107P-201ENST00000516617 154 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 BNIP3P6-201ENST00000549284 499 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AC008250.2-201ENST00000615261 205 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 AP000770.2-201ENST00000623694 100 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 SNORD114-19-201ENST00000363072 75 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 SNORD115-8-201ENST00000363856 82 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNU6-1141P-201ENST00000364520 107 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 SNORD115-38-201ENST00000365037 82 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 SNORD115-7-201ENST00000365306 82 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.381-201ENST00000365666 102 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNU6-1286P-201ENST00000383871 107 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AL590556.1-201ENST00000423231 483 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 CETN4P-201ENST00000432407 469 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 HSPE1P24-201ENST00000450782 238 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RPL23AP3-201ENST00000453844 468 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AP001324.2-201ENST00000461163 319 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 MTCO3P38-201ENST00000468910 766 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNU6-189P-201ENST00000516120 101 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNU6-586P-201ENST00000517265 104 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC104576.1-201ENST00000524225 88 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC025678.1-201ENST00000567861 338 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AL121992.2-201ENST00000606262 256 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC005520.5-201ENST00000613926 164 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AL773524.1-201ENST00000614065 229 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC073534.2-201ENST00000620377 381 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 MIR338-201ENST00000636369 67 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 MIR6759-201ENST00000638110 65 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNU6-179P-201ENST00000363350 107 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.296-201ENST00000364930 108 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNU6-933P-201ENST00000384424 107 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AL356432.1-201ENST00000405809 419 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RN7SKP142-201ENST00000411236 328 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC022364.2-201ENST00000457963 554 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNA5SP269-201ENST00000459032 137 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC117454.1-201ENST00000491120 168 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC116562.3-201ENST00000506136 177 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNU6-1220P-201ENST00000517126 108 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC068587.5-201ENST00000528506 175 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 MTCO3P23-201ENST00000561363 289 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RPL30P11-203ENST00000598995 310 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC078795.2-201ENST00000602835 1252 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AL022161.1-201ENST00000604390 213 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 Z82243.1-201ENST00000609432 473 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AC004908.3-201ENST00000610248 625 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 DISC2.1-201ENST00000612827 205 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 AL359314.1-201ENST00000616913 261 ntBASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.71□□□□□ -2.3
COL6A6A6NMZ7 RNU6-862P-201ENST00000362804 105 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms