Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 AC036111.3-201ENST00000526389 112 ntBASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 AC122134.1-202ENST00000569111 1201 ntBASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 MIR4778-201ENST00000577635 80 ntBASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 MIR4666A-201ENST00000580160 79 ntBASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 MIR3192-201ENST00000584920 77 ntBASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 AC064872.1-201ENST00000604823 1072 ntBASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 AC007014.2-201ENST00000615581 479 ntBASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 AP000943.4-201ENST00000622912 357 ntBASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 MIR6079-201ENST00000635807 62 ntBASIC-0.43□□□□□ -2.48
CPSF4LA6NMK7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 SNORA9.1-201ENST00000362412 131 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 SNORA27.3-201ENST00000364937 134 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 MIR593-201ENST00000384856 100 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 SNORD65C-201ENST00000390962 71 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 SNORA75.6-201ENST00000391318 127 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 MIR1185-1-201ENST00000408598 86 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 SNORD83.1-201ENST00000411362 77 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC019070.1-201ENST00000415008 1024 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC016909.1-201ENST00000415916 166 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AL365338.1-201ENST00000422282 858 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 TPT1P7-201ENST00000458300 517 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC091874.1-201ENST00000511402 339 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC074133.1-201ENST00000515696 183 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 MIR3612-201ENST00000579753 87 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 MIR4743-201ENST00000584576 69 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC005176.2-201ENST00000596933 147 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC092447.9-201ENST00000603395 144 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 BNIP3P9-201ENST00000603714 553 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC022217.4-201ENST00000604389 163 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 AL512643.1-201ENST00000635735 524 ntBASIC-0.44□□□□□ -2.48
CPSF4LA6NMK7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 RNU6-369P-201ENST00000362515 102 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 SNORA1.1-201ENST00000364671 133 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 SNORA2.2-201ENST00000365473 135 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 RNU6-127P-201ENST00000390897 107 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 PCNPP3-201ENST00000393579 471 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 AL591704.1-201ENST00000432574 275 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 MTND4LP16-201ENST00000440828 295 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 STAG3L5P-204ENST00000443759 179 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 SNORD111.1-201ENST00000516421 86 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 RNA5SP94-201ENST00000516917 108 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 RNU6-143P-201ENST00000516942 93 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 AC105185.1-201ENST00000518705 535 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 AL157871.3-201ENST00000557231 293 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 AL133153.1-201ENST00000557756 303 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 AC234772.3-201ENST00000602277 528 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 BCRP9-201ENST00000605312 388 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 RPL21P136-201ENST00000605378 396 ntBASIC-0.45□□□□□ -2.48
CPSF4LA6NMK7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 SNORA8.2-201ENST00000384372 139 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 MIR301A-201ENST00000385261 86 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 RNU6-817P-201ENST00000391083 104 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 RNU6-994P-201ENST00000410507 111 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 MTCO2P7-201ENST00000446518 666 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 snoU109.2-201ENST00000459316 135 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 SCARNA8-201ENST00000515924 131 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 MIR4764-201ENST00000580680 88 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AC012507.3-201ENST00000603556 477 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AC024060.1-201ENST00000607052 494 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AP001033.2-201ENST00000609701 1003 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AC104073.3-201ENST00000610942 955 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AP000484.1-201ENST00000620067 1252 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 MIR8054-201ENST00000620877 86 ntBASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.46□□□□□ -2.48
CPSF4LA6NMK7 BX322639.1-202ENST00000423987 2213 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms