Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 AC233702.2-202ENST00000562547 291 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 MIR4303-201ENST00000581299 66 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 MIR3672-201ENST00000584290 82 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 MIR3942-201ENST00000585264 109 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 AC078795.3-201ENST00000602913 472 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 AL078605.1-201ENST00000603529 500 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 AC080078.2-201ENST00000603766 501 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 SNORD98-201ENST00000636377 67 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 AC121333.1-201ENST00000567488 2709 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.151-201ENST00000363566 112 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 MIR95-201ENST00000385072 81 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 RNU6-321P-201ENST00000410912 106 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 RNU2-32P-201ENST00000411193 191 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 AL513185.2-201ENST00000425543 193 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 Z82205.1-201ENST00000428456 297 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 RPS15AP10-201ENST00000432472 382 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 IFNA20P-201ENST00000436840 528 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 AC009238.1-201ENST00000442165 424 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 AC009237.6-201ENST00000446969 424 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 CYP2C59P-201ENST00000457790 269 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 RNU6-1037P-201ENST00000459571 107 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 RPS29P25-201ENST00000481709 171 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 AC145146.1-201ENST00000496370 254 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 FAM206BP-201ENST00000510179 541 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 AC025465.4-201ENST00000513422 638 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 AC026371.1-201ENST00000551867 419 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 MIR3976-201ENST00000606807 139 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 SNORA43.4-201ENST00000629559 138 ntBASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
NKX2-6A6NCS4 AC009541.1-201ENST00000438279 2662 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.100-201ENST00000363141 102 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 RNU6-1141P-201ENST00000364520 107 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 RNA5SP240-201ENST00000365355 128 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 RNU6-214P-201ENST00000384130 107 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 RNU6-831P-201ENST00000384548 107 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 RNU2-48P-201ENST00000410694 191 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 USP9YP28-201ENST00000435142 589 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 NDUFA5P4-201ENST00000436704 385 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 MTCO3P18-201ENST00000440206 761 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AC124916.1-201ENST00000444020 547 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AC007547.1-201ENST00000462177 490 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 RPS29P27-201ENST00000463711 170 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AL163540.1-201ENST00000485382 386 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 RNU6-667P-201ENST00000517186 102 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 SNORA31.25-201ENST00000517242 134 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 MTND4LP26-201ENST00000518144 282 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AC007375.1-201ENST00000554513 578 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AL034555.1-201ENST00000604816 211 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 MIR502-201ENST00000606349 86 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AC008121.3-201ENST00000618726 433 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 AL450472.1-202ENST00000637286 180 ntBASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NKX2-6A6NCS4 MIR337-201ENST00000362281 93 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 SNORD115-3-201ENST00000363100 82 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 SNORD113-7-201ENST00000363762 77 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.573-201ENST00000384763 105 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 MIR521-1-201ENST00000384902 87 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 MIR561-201ENST00000385216 97 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AL512604.1-201ENST00000404812 257 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 SNRPEP10-201ENST00000420249 274 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 EIF1P1-201ENST00000421436 341 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AL645568.3-201ENST00000433683 316 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 MTND1P11-201ENST00000456661 876 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 snoU13.6-201ENST00000458785 104 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AC005840.1-201ENST00000498412 377 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 TRBVA-201ENST00000498804 316 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AC107393.1-201ENST00000512403 346 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 RNU6-256P-201ENST00000516747 97 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 RNU6-1088P-201ENST00000516850 104 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 SNORA48.11-201ENST00000517015 89 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 RNU6-1314P-201ENST00000517139 104 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 MTND1P5-201ENST00000517906 940 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AC107953.1-201ENST00000522216 297 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 MRPS36P4-201ENST00000534436 298 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 MIR1248-201ENST00000629190 106 ntBASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.86-201ENST00000363020 111 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.123-201ENST00000363338 102 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms