Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTPDC1A2A3K4 AL109809.4-201ENST00000603520 2185 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 RNU1-35P-201ENST00000362782 153 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 SNORA9.2-201ENST00000365361 133 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.458-201ENST00000384240 102 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 RNU6-713P-201ENST00000384761 107 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 MIR181B1-201ENST00000385240 110 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 RNA5SP213-201ENST00000391031 106 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 RNU1-101P-201ENST00000391171 127 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 AC009414.1-201ENST00000427200 443 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 AL135938.1-201ENST00000443141 297 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 HMGB1P35-201ENST00000503360 598 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 AC067942.3-201ENST00000512025 362 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 AC091826.1-201ENST00000514065 313 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 RNU6-58P-201ENST00000517143 103 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 CYP4A27P-201ENST00000567218 190 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 AC006006.1-201ENST00000603082 144 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 MIR8062-201ENST00000621515 85 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 AC110079.1-202ENST00000635213 138 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 AP003122.5-201ENST00000527668 3766 ntBASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTPDC1A2A3K4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 AL079305.1-201ENST00000623159 3008 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 AC091564.4-201ENST00000533934 2194 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.183-201ENST00000363882 113 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 RNU6-770P-201ENST00000363929 105 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.512-201ENST00000384518 102 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 MIR181A2-201ENST00000384863 110 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 MIR10B-201ENST00000385011 110 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 RNU6-159P-201ENST00000391080 106 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 MIR1289-1-201ENST00000408836 144 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 RPS15AP7-201ENST00000439294 405 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 AC096638.1-201ENST00000444678 216 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 AC112771.1-201ENST00000463581 102 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 RPL36AP48-201ENST00000485521 314 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 RNY3P15-201ENST00000516297 97 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 RNA5SP367-201ENST00000516557 118 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 RNA5SP54-201ENST00000516951 92 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.713-201ENST00000517013 96 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 AC079598.5-201ENST00000547460 117 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 GTF3AP2-201ENST00000557014 266 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 AC073410.2-201ENST00000603240 332 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 AC005296.1-201ENST00000616145 209 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 AC010205.1-201ENST00000616668 449 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 AC130454.1-201ENST00000622948 401 ntBASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPDC1A2A3K4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 RNU6-879P-201ENST00000364328 108 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 RNA5SP139-201ENST00000364340 117 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 SNORA51.4-201ENST00000364993 124 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 MIR487A-201ENST00000385009 80 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 SNORD78.2-201ENST00000391076 69 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 RNU6-130P-201ENST00000411112 103 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AIMP1P2-201ENST00000425294 312 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 WARS2P1-201ENST00000429678 537 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AC091179.1-201ENST00000461606 579 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 RNU6-1012P-201ENST00000516606 109 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 MIR3923-201ENST00000579521 83 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AL034555.1-201ENST00000604816 211 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AC107871.2-201ENST00000612894 502 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 AC005520.5-201ENST00000613926 164 ntBASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPDC1A2A3K4 Y_RNA.19-201ENST00000362462 99 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 SNORA18.3-201ENST00000384122 132 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 RNU6-505P-201ENST00000384427 107 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 RNU1-57P-201ENST00000384491 166 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 MIR186-201ENST00000384988 86 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 AC107016.2-201ENST00000547968 190 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 AL133393.1-201ENST00000603277 287 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 UCA1.1-201ENST00000620952 75 ntBASIC3.35□□□□□ -1.87
PTPDC1A2A3K4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms