Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC092451.2-201ENST00000538746 658 ntBASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 AC008521.1-201ENST00000587471 187 ntBASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 AC078795.3-201ENST00000602913 472 ntBASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 AC064872.1-201ENST00000604823 1072 ntBASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 AC116165.2-201ENST00000616705 206 ntBASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
TRAV4A0A0B4J268 SNORA33-201ENST00000363664 130 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-505P-201ENST00000384427 107 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 MIR548J-201ENST00000408833 112 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 AL133396.1-201ENST00000432048 687 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 AC092628.1-201ENST00000436250 252 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 TAF9P1-201ENST00000445421 515 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 TAF9P2-201ENST00000454958 515 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 RPS26P48-201ENST00000491713 339 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 AC113410.1-201ENST00000505029 247 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 AC117522.1-201ENST00000509821 380 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-947P-201ENST00000516264 106 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-948P-201ENST00000516374 107 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 RNA5SP337-201ENST00000517007 109 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 MIR5000-201ENST00000577717 103 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 MIR4753-201ENST00000585119 83 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 AC073539.2-201ENST00000597113 165 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 AC009994.1-201ENST00000606889 253 ntBASIC0.32□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-37P-201ENST00000362692 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-552P-201ENST00000362869 119 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 SNORD18A-201ENST00000363753 72 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-11P-201ENST00000364234 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 SNORD32A-201ENST00000364805 84 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-25P-201ENST00000383873 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-1-201ENST00000383898 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-48P-201ENST00000384161 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-36P-201ENST00000384172 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-4P-201ENST00000384205 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-5P-201ENST00000384238 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-3P-201ENST00000384314 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-16P-201ENST00000384385 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-15P-201ENST00000384534 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-2-201ENST00000384627 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-29P-201ENST00000384637 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-9-201ENST00000384776 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-33P-201ENST00000384793 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNA5SP323-201ENST00000391094 133 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 MIR1283-1-201ENST00000408494 87 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU2-39P-201ENST00000410604 198 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 MTATP6P20-201ENST00000414147 562 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 AL035398.1-201ENST00000430869 322 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RPEP5-201ENST00000441137 268 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 GAPDHP17-201ENST00000449858 1001 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU7-90P-201ENST00000459216 62 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 AC104982.1-201ENST00000478775 574 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 Z98751.3-201ENST00000604447 521 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-6P-201ENST00000606623 107 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 AC064807.4-201ENST00000607201 407 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 AC005520.5-201ENST00000613926 164 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 AC106754.2-201ENST00000623006 233 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 CASC19-280ENST00000642102 1351 ntBASIC0.31□□□□□ -2.36
TRAV4A0A0B4J268 Y_RNA.164-201ENST00000363709 102 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 RNA5SP499-201ENST00000363982 119 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-336P-201ENST00000364891 107 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-945P-201ENST00000383947 107 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 SNORA50A-201ENST00000384225 134 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-1235P-201ENST00000384559 107 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 MIR208B-201ENST00000401172 77 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 AC244023.1-201ENST00000426884 112 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 CALM2P2-201ENST00000428512 440 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 HMGN2P34-201ENST00000437647 269 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 MTND3P1-201ENST00000441336 220 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 AL358794.1-201ENST00000445689 381 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 AL606662.1-201ENST00000445763 553 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 RNU7-21P-201ENST00000459430 62 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-498P-201ENST00000459468 107 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 SNORA19.3-201ENST00000516165 130 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-229P-201ENST00000516614 102 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 AL021368.1-201ENST00000607490 540 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 MIR5087-201ENST00000635826 76 ntBASIC0.3□□□□□ -2.36
TRAV4A0A0B4J268 ELL2P3-201ENST00000457883 1602 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-562P-201ENST00000362731 107 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms