Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC093591.1-201ENST00000491435 481 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 RPL21P16-201ENST00000495531 483 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 MIR4680-201ENST00000580906 66 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 AL356280.1-201ENST00000603614 379 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 AC005034.5-201ENST00000604219 466 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 AL162373.1-201ENST00000620433 407 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 Z82209.1-201ENST00000422141 2135 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 MIR148B-201ENST00000362252 99 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU6-461P-201ENST00000364195 107 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 Y_RNA.455-201ENST00000384230 98 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 RNY3P4-201ENST00000384428 101 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 SNORA46.1-201ENST00000391069 153 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 EIF1P2-201ENST00000428233 350 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AC112220.1-201ENST00000434628 355 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 RPL21P2-201ENST00000440049 481 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AL161788.1-201ENST00000441805 169 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AC096638.1-201ENST00000444678 216 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 Z96811.1-201ENST00000445880 108 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AC146507.2-201ENST00000460608 476 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 SNORA64.4-201ENST00000516632 81 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 Y_RNA.713-201ENST00000517013 96 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AC022868.1-201ENST00000517767 391 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AP002404.1-201ENST00000532005 451 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AL713866.2-201ENST00000603579 219 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AL360085.1-201ENST00000604713 532 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 AC091812.1-201ENST00000432235 1948 ntBASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHGA9Q9Y5G4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 MTND4P1-201ENST00000457501 1466 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 RNA5SP197-201ENST00000363357 119 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 SNORA63C-201ENST00000364578 129 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 snosnR66.1-201ENST00000391095 99 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 FO393413.1-201ENST00000402892 195 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 MIR1294-201ENST00000408503 142 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 AC096644.2-201ENST00000429278 159 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 WARS2P1-201ENST00000429678 537 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 RPL23AP67-201ENST00000465341 474 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 RN7SL283P-201ENST00000489055 303 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 RPL23AP94-201ENST00000512518 302 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU6-764P-201ENST00000516396 105 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 HSPE1P18-201ENST00000517602 280 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 HSPE1P20-201ENST00000538133 289 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 AP002770.2-201ENST00000543613 532 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 TCL6_2.1-201ENST00000615162 119 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 AC006386.2-201ENST00000624491 75 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 AC012005.1-201ENST00000624575 75 ntBASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PCDHGA9Q9Y5G4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU1-62P-201ENST00000362599 164 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 SNORA80A-201ENST00000363922 136 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 RNY3P11-201ENST00000364153 102 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU6-281P-201ENST00000384212 103 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 Y_RNA.551-201ENST00000384661 102 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 MIR10B-201ENST00000385011 110 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 AL031121.1-201ENST00000406553 254 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 RN7SL863P-201ENST00000462370 296 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 AC083906.5-201ENST00000503722 328 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 Y_RNA.720-201ENST00000517166 92 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 AC040926.1-201ENST00000530195 238 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 AC018630.3-201ENST00000542637 96 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 MIR3117-201ENST00000584034 78 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 AL390123.1-201ENST00000603216 237 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 AC124312.5-201ENST00000604451 268 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 AC005562.2-201ENST00000618264 111 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 ZNF204P-201ENST00000416749 2397 ntBASIC3.03□□□□□ -1.92
PCDHGA9Q9Y5G4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
PCDHGA9Q9Y5G4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms