Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.36□□□□□ -2.03
LSM4Q9Y4Z0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RNU1-23P-201ENST00000363361 144 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RNU6-99P-201ENST00000364721 107 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RNU6-26P-201ENST00000383985 107 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RNU6-546P-201ENST00000383991 107 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 SNORD67-201ENST00000390833 111 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 AC007098.1-201ENST00000420122 367 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 MTCO3P29-201ENST00000432119 779 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 AL035666.1-201ENST00000446195 348 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 GSTA11P-201ENST00000452866 669 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RNU7-26P-201ENST00000458980 63 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RN7SL429P-201ENST00000479090 223 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RN7SL489P-201ENST00000486185 223 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RN7SL327P-201ENST00000488659 223 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 Y_RNA.706-201ENST00000516933 99 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RNU6-58P-201ENST00000517143 103 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 AL355802.3-201ENST00000607571 545 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 AL359314.1-201ENST00000616913 261 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 RN7SL853P-201ENST00000617250 223 ntBASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LSM4Q9Y4Z0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 Y_RNA.197-201ENST00000364004 102 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 SNORA71.1-201ENST00000364523 117 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 SNORA12-201ENST00000391162 147 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 RNU6-1156P-201ENST00000410365 100 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 RNU2-32P-201ENST00000411193 191 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 ARL5AP4-201ENST00000430731 512 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 AC022616.8-201ENST00000533569 253 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 AC004584.2-201ENST00000570407 410 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 AC090115.4-201ENST00000609970 188 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.34□□□□□ -2.03
LSM4Q9Y4Z0 BX322639.1-202ENST00000423987 2213 ntBASIC2.34□□□□□ -2.04
LSM4Q9Y4Z0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
LSM4Q9Y4Z0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LSM4Q9Y4Z0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 RNU1-35P-201ENST00000362782 153 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 Y_RNA.319-201ENST00000365138 92 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 RNU1-109P-201ENST00000383960 147 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 Y_RNA.463-201ENST00000384271 102 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 TOMM22P6-201ENST00000465035 409 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AC018868.1-201ENST00000491307 315 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 RNU6-976P-201ENST00000516086 111 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 RN7SKP272-201ENST00000516988 232 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AC007536.1-201ENST00000533382 349 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AC027288.2-201ENST00000553028 243 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AC026470.2-201ENST00000561492 181 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AC016727.2-201ENST00000603988 621 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 AL080274.1-201ENST00000605565 220 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 MIR6733-201ENST00000635723 61 ntBASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
LSM4Q9Y4Z0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 Y_RNA.106-201ENST00000363189 100 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 SNORA38-201ENST00000363946 132 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 SNORA25B-201ENST00000365507 128 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 Y_RNA.364-201ENST00000365532 101 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 SNORD42.2-201ENST00000365570 69 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 Y_RNA.395-201ENST00000383945 109 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 RNU6-301P-201ENST00000384277 107 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 SNORA54-201ENST00000384281 123 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 RNU6-541P-201ENST00000384709 110 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 MIR487A-201ENST00000385009 80 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 RNU6-159P-201ENST00000391080 106 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 RNU2-48P-201ENST00000410694 191 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 RPL19P1-201ENST00000411635 428 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 AC099799.1-201ENST00000439809 192 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 AC009238.1-201ENST00000442165 424 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 AC009237.6-201ENST00000446969 424 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 Y_RNA.639-201ENST00000458981 102 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 MIR2053-201ENST00000459295 91 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 AC103975.1-201ENST00000482506 483 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 RNU7-4P-201ENST00000516961 62 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 RNU6-699P-201ENST00000517081 110 ntBASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LSM4Q9Y4Z0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms