Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC007215.1-201ENST00000464893 276 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 RNU6-966P-201ENST00000516479 104 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 AL162713.1-201ENST00000604480 262 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 AC004467.1-201ENST00000615678 330 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 ADAM3A-203ENST00000461344 2157 ntBASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTCBQ9Y3I0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 AC099654.7-201ENST00000635788 2127 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 Y_RNA.272-201ENST00000364696 102 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 RNU6-793P-201ENST00000384233 104 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 RAB28P5-201ENST00000427490 651 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 RPL26P9-201ENST00000457466 433 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 RPL30P12-201ENST00000474666 353 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 AL121594.1-201ENST00000475906 575 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 RNU5F-8P-201ENST00000515941 111 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 AC021739.1-201ENST00000559631 174 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 MIR3145-201ENST00000580727 82 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 uc_338.32-201ENST00000615087 172 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 AC092628.2-201ENST00000622492 339 ntBASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.3□□□□□ -1.72
RTCBQ9Y3I0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 RNU6-487P-201ENST00000365430 104 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 SNORD116-18-201ENST00000383961 92 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 RNU6-245P-201ENST00000384020 107 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 RNU6-1310P-201ENST00000384153 107 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 Y_RNA.571-201ENST00000384753 98 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AL512633.1-201ENST00000399931 655 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 RNU5E-9P-201ENST00000411164 104 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AC019205.3-201ENST00000424573 156 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AP000873.1-201ENST00000463987 400 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AL049830.2-201ENST00000480072 201 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 RPS29P20-201ENST00000489592 171 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 HMGB3P3-201ENST00000510526 400 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AC090897.2-201ENST00000581715 130 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 MIR3124-201ENST00000582636 67 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 AL133393.1-201ENST00000603277 287 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.29□□□□□ -1.72
RTCBQ9Y3I0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 RNA5SP42-201ENST00000364278 115 ntBASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 RNU6-1248P-201ENST00000391096 64 ntBASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 AC084357.1-201ENST00000473404 255 ntBASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 RNU6-155P-201ENST00000516347 100 ntBASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 AL356575.1-201ENST00000603008 283 ntBASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 MAPK10-373ENST00000641983 6772 ntBASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTCBQ9Y3I0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 SNORA31-201ENST00000362607 130 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 RNU6-1272P-201ENST00000362776 107 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 Y_RNA.343-201ENST00000365354 112 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 RNU6-1130P-201ENST00000365434 107 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 RNU6-622P-201ENST00000384272 103 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 RNU6-1199P-201ENST00000411249 104 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 ELOCP21-201ENST00000412558 336 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 BPY2DP-201ENST00000422208 265 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 RPS15AP5-201ENST00000436276 388 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 SNORA31.16-201ENST00000516773 139 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 RNU6-928P-201ENST00000516876 104 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 ACA59.2-201ENST00000517061 156 ntBASIC4.27□□□□□ -1.73
RTCBQ9Y3I0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms