Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 RNU4-66P-201ENST00000365199 138 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-1329P-201ENST00000365664 107 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-1026P-201ENST00000384465 108 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 RPL7P54-201ENST00000438336 674 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 U8.21-201ENST00000459536 136 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 RPL23AP63-201ENST00000498752 471 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 FAM206BP-201ENST00000510179 541 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 AC025465.3-201ENST00000510570 311 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 SNORD60.2-201ENST00000516883 86 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-323P-201ENST00000521915 107 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 DEFB131C-201ENST00000528817 165 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 AC025423.5-201ENST00000550230 219 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 SCOCP1-201ENST00000554676 349 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 AC074050.1-201ENST00000563247 211 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 MIR5692C1-201ENST00000585309 91 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 uc_338.5-201ENST00000611839 155 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 MIR8074-201ENST00000615081 81 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 AC022079.1-201ENST00000621546 602 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.38□□□□□ -2.19
KCNIP3Q9Y2W7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-562P-201ENST00000362731 107 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 RNU5B-2P-201ENST00000363036 113 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 Y_RNA.167-201ENST00000363735 109 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 SNORA18.2-201ENST00000383865 132 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 SNORA69-201ENST00000383895 132 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 Y_RNA.481-201ENST00000384373 102 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-1093P-201ENST00000391194 107 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 Z92545.1-201ENST00000411782 234 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 RPS26P42-201ENST00000413485 326 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 MTCO1P21-201ENST00000416634 589 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 Z98742.3-201ENST00000418637 326 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 USP9YP28-201ENST00000435142 589 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AC099677.2-201ENST00000436385 175 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AL359672.1-201ENST00000442302 409 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 snoU13.6-201ENST00000458785 104 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-1208P-201ENST00000459588 107 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 SNORA19.2-201ENST00000516013 114 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-835P-201ENST00000516974 104 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AC104576.1-201ENST00000524225 88 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 CTHRC1P1-201ENST00000605383 469 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AL357078.3-201ENST00000607528 618 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AC245008.1-201ENST00000608123 476 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AC092807.2-201ENST00000609367 243 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AC068792.1-201ENST00000621354 417 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AC068205.3-201ENST00000636385 468 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 AL159152.1-201ENST00000635019 2587 ntBASIC1.37□□□□□ -2.19
KCNIP3Q9Y2W7 MTND5P26-201ENST00000426018 1752 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-1317P-201ENST00000364582 104 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 SNORA29-201ENST00000384183 140 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 MIR514A2-201ENST00000385131 88 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 MIR514A3-201ENST00000385132 88 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-648P-201ENST00000410190 107 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 RPL21P111-201ENST00000418453 477 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 ARL5AP1-201ENST00000418991 388 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 TIMM9P3-201ENST00000428659 274 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 MTND3P9-201ENST00000429526 346 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 UBE2V1P8-201ENST00000437166 265 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 HMGB1P18-201ENST00000438801 619 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 AC005908.1-201ENST00000468701 347 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-405P-201ENST00000516637 110 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-856P-201ENST00000516959 98 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 AL157687.1-201ENST00000554853 619 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 AC069114.2-201ENST00000604699 304 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 AL121757.2-201ENST00000611223 313 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 AC083806.3-201ENST00000614016 455 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.36□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-1286P-201ENST00000383871 107 ntBASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 Y_RNA.409-201ENST00000383990 98 ntBASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-1042P-201ENST00000384204 107 ntBASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 AC007098.1-201ENST00000420122 367 ntBASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 AL139415.2-201ENST00000431968 163 ntBASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.35□□□□□ -2.19
KCNIP3Q9Y2W7 AC114801.2-201ENST00000503825 781 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms