Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 U3.4-201ENST00000363352 213 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 RNU6-534P-201ENST00000364877 106 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 SNORA12.2-201ENST00000391040 156 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 SNORA26.3-201ENST00000391119 136 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 RPS20P2-201ENST00000402520 389 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AL031779.1-201ENST00000415663 330 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 RPL23AP95-201ENST00000426806 265 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC048334.1-201ENST00000477975 159 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC116353.3-201ENST00000511215 249 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 RNA5SP168-201ENST00000516642 112 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AL121579.1-201ENST00000555129 305 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC023932.2-201ENST00000603176 175 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC097478.2-201ENST00000610572 514 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC136475.10-201ENST00000620253 385 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC073544.1-201ENST00000600110 1595 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 RNU6-384P-201ENST00000364900 104 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 SNORD114-24-201ENST00000365029 72 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 MIR558-201ENST00000384920 94 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 MIR548B-201ENST00000385247 97 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 RNU6-298P-201ENST00000390888 96 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 MTND1P32-201ENST00000433043 938 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 RPS24P1-201ENST00000438550 371 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 RAP1BP2-201ENST00000478270 544 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 AC145146.1-201ENST00000496370 254 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 AP003072.2-201ENST00000527756 676 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 AC008752.3-201ENST00000588113 712 ntBASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.44□□□□□ -2.34
SCN8AQ9UQD0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AL391994.1-201ENST00000254724 282 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 RNU2-70P-201ENST00000410718 179 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 RNA5SP111-201ENST00000411386 101 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 SNORA31.2-201ENST00000516019 134 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AC023050.2-201ENST00000544968 387 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 ZNF321P-202ENST00000550843 495 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AL596327.1-201ENST00000603629 213 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 CTHRC1P1-201ENST00000605383 469 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AC005520.5-201ENST00000613926 164 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 RNU6-950P-201ENST00000384651 107 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 RNU6-1179P-201ENST00000384667 107 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AC006461.1-201ENST00000412637 326 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AC114482.1-201ENST00000418010 247 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 MTND3P5-201ENST00000512798 333 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AC087883.1-201ENST00000551882 391 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 AL513534.2-201ENST00000603836 250 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 RMST_7.1-201ENST00000621935 268 ntBASIC0.43□□□□□ -2.34
SCN8AQ9UQD0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 RNU6-371P-201ENST00000364283 108 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 RN7SKP200-201ENST00000410564 320 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 CALM2P2-201ENST00000428512 440 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 USP9YP14-201ENST00000430663 563 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 AC002486.1-201ENST00000435098 391 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 SNRPEP8-201ENST00000442866 260 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 AL360271.2-201ENST00000447710 161 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 SNORA70.22-201ENST00000517160 124 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 AC136628.3-201ENST00000521868 290 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 AC090888.2-201ENST00000559765 1144 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 MIR548AC-201ENST00000585049 88 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 AC009509.4-201ENST00000619202 509 ntBASIC0.42□□□□□ -2.34
SCN8AQ9UQD0 RNA5SP259-201ENST00000365541 109 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 HIGD1AP15-201ENST00000416198 280 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 SRRM1P2-201ENST00000464531 1192 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 PDCD5P2-201ENST00000507570 312 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC112206.4-201ENST00000515142 405 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 RNU6-1003P-201ENST00000517099 105 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC008088.1-201ENST00000580993 280 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC112187.2-201ENST00000604345 283 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC105148.1-201ENST00000604961 409 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 RNU6-562P-201ENST00000362731 107 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 Y_RNA.465-201ENST00000384293 102 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC078809.1-201ENST00000427601 140 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 RNU1-86P-201ENST00000516108 154 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 RNU1-107P-201ENST00000516617 154 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AL590705.4-201ENST00000532209 134 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC123904.2-201ENST00000548059 300 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms