Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 MIR4431-201ENST00000579990 94 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 AL137843.1-201ENST00000605078 385 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 MIR7702-201ENST00000621931 59 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 MIR3199-2-201ENST00000636243 86 ntBASIC4.72□□□□□ -1.65
ZC3H4Q9UPT8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
ZC3H4Q9UPT8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 Y_RNA.273-201ENST00000364703 102 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-44P-201ENST00000384045 107 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-578P-201ENST00000390980 103 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 RNA5SP120-201ENST00000410900 112 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 MTND4LP9-201ENST00000427694 174 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 AC105137.2-201ENST00000569073 466 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 MIR3136-201ENST00000583498 78 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 YPEL5P2-201ENST00000605553 359 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 RNU1-30P-201ENST00000606575 163 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 MIR3658-201ENST00000636291 56 ntBASIC4.71□□□□□ -1.66
ZC3H4Q9UPT8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AC073073.2-201ENST00000609827 2578 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AC002543.1-201ENST00000299783 1954 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-215P-201ENST00000365169 102 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 MIR199A2-201ENST00000385289 110 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 SNORA26.5-201ENST00000391215 123 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AC005326.1-201ENST00000429197 123 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 RPL31P41-201ENST00000477967 372 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AIG1P1-201ENST00000503376 148 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-1007P-201ENST00000516586 107 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AC022616.8-201ENST00000533569 253 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AC011602.1-201ENST00000546484 331 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 MIR3923-201ENST00000579521 83 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 MIR4727-201ENST00000622232 55 ntBASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZC3H4Q9UPT8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 RNU1-15P-201ENST00000353977 144 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 Y_RNA.127-201ENST00000363386 109 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-103P-201ENST00000363686 107 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 Y_RNA.218-201ENST00000364218 104 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 Y_RNA.287-201ENST00000364853 94 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-487P-201ENST00000365430 104 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 SNORA8.3-201ENST00000384679 139 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 MIR490-201ENST00000384865 128 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 CBX3P9-201ENST00000402326 552 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 AL133475.1-201ENST00000404414 305 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 AL035461.1-201ENST00000421490 332 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 BPY2DP-201ENST00000422208 265 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 AC083863.1-201ENST00000438811 231 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 AC008155.2-201ENST00000464337 397 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 AC107626.1-201ENST00000471084 183 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 RNU1-117P-201ENST00000517041 158 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 MIR4474-201ENST00000579189 78 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 DNAJC19P2-201ENST00000593340 302 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 MIR8058-201ENST00000615737 89 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 AC013791.1-201ENST00000616619 62 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZC3H4Q9UPT8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 AC010329.5-201ENST00000623497 2174 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 AC011266.1-201ENST00000624119 3569 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-1048P-201ENST00000364054 107 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-801P-201ENST00000364087 105 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-454P-201ENST00000364292 107 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 SNORD87-201ENST00000364849 89 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 MIR591-201ENST00000385290 95 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 SNORD37.2-201ENST00000391075 66 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 RNA5SP306-201ENST00000411087 107 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-1234P-201ENST00000516877 103 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 AC012493.2-201ENST00000595083 291 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms