Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 AC021205.2-201ENST00000480069 347 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 SCARNA13-201ENST00000516672 275 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-94P-201ENST00000607728 107 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 MIR3674-201ENST00000636576 68 ntBASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.02□□□□□ -1.61
PDZRN3Q9UPQ7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-1205P-201ENST00000363625 106 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 RNA5SP97-201ENST00000365006 84 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 U8.11-201ENST00000384699 133 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 U8.12-201ENST00000384701 133 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 MIR491-201ENST00000384877 84 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-279P-201ENST00000391297 101 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 RN7SKP53-201ENST00000411337 315 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 AC112220.1-201ENST00000434628 355 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 MTATP8P2-201ENST00000435212 202 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 SNRPGP5-201ENST00000456003 220 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 U8.18-201ENST00000459285 133 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 AC110768.1-201ENST00000509222 400 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-158P-201ENST00000517104 100 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 AC093331.1-201ENST00000521474 169 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 POLR3GP1-201ENST00000594073 261 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 AC006380.1-201ENST00000603598 186 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDZRN3Q9UPQ7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 AL359693.1-201ENST00000614959 2407 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 SNORD45.3-201ENST00000363836 72 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 RNU2-32P-201ENST00000411193 191 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 FTH1P6-201ENST00000430768 320 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 AL356535.1-201ENST00000440335 398 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 RPL39P34-201ENST00000477141 156 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 MRPS36P2-201ENST00000512569 299 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 IGKV2D-19-201ENST00000523346 262 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 AL360157.1-201ENST00000565962 87 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 MIR4724-201ENST00000579485 89 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 AC131055.1-201ENST00000584626 316 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 RNA5SP108-201ENST00000605921 117 ntBASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5□□□□□ -1.61
PDZRN3Q9UPQ7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 Y_RNA.323-201ENST00000365157 109 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 SNORA36C-201ENST00000384289 132 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-136P-201ENST00000384663 107 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 MIR590-201ENST00000385008 97 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 SNORA40C-201ENST00000391285 128 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 AL513331.1-201ENST00000411908 397 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 snoU109.2-201ENST00000459316 135 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 AC010531.2-201ENST00000465012 153 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 RN7SL271P-201ENST00000487601 295 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-1095P-201ENST00000516148 108 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 RN7SKP234-201ENST00000517173 224 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 SNORA70.24-201ENST00000517233 118 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 IGKV1-22-201ENST00000524313 326 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 YPEL5P3-201ENST00000547227 352 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDZRN3Q9UPQ7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 AC116096.1-201ENST00000566804 2314 ntBASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 AC022336.2-201ENST00000568966 2538 ntBASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 Y_RNA.179-201ENST00000363844 90 ntBASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 RNU6-978P-201ENST00000364371 103 ntBASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 PGBD4P5-201ENST00000445958 426 ntBASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 RNU7-141P-201ENST00000459304 62 ntBASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 AC139453.3-201ENST00000493276 369 ntBASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 AL355812.1-201ENST00000603215 216 ntBASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDZRN3Q9UPQ7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDZRN3Q9UPQ7 AC092268.1-201ENST00000342691 405 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms