Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 RNU6-750P-201ENST00000390946 107 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 HMGN1P18-201ENST00000457642 277 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 RN7SKP282-201ENST00000516824 299 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AC233702.2-202ENST00000562547 291 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 MIR3923-201ENST00000579521 83 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AL356575.1-201ENST00000603008 283 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 MZT1P2-201ENST00000604387 248 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AL034555.1-201ENST00000604816 211 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AL137843.1-201ENST00000605078 385 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AC069200.1-201ENST00000609511 323 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AC005520.5-201ENST00000613926 164 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AC006001.4-201ENST00000622243 395 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 SNORA25.1-201ENST00000362326 128 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.40-201ENST00000362645 93 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 SNORD114-19-201ENST00000363072 75 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.199-201ENST00000364014 102 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.331-201ENST00000365267 102 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 RNU6-245P-201ENST00000384020 107 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 SNORA5A-201ENST00000384111 134 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 RNU6-793P-201ENST00000384233 104 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 CBX3P9-201ENST00000402326 552 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 U3.39-201ENST00000408569 239 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 AL365496.1-201ENST00000426885 215 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 AC006989.1-201ENST00000427212 131 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 UQCRBP2-201ENST00000447827 297 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 AC104619.4-201ENST00000510773 249 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 RNU6-579P-201ENST00000516879 102 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 RN7SKP40-201ENST00000517211 242 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 AC023632.4-201ENST00000517783 191 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 AL162713.1-201ENST00000604480 262 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 AC022149.2-201ENST00000621061 203 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 CR392039.5-201ENST00000623201 510 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 Z83843.1-201ENST00000604070 3685 ntBASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRPF3Q9ULD4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 RNU6-740P-201ENST00000364734 105 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.446-201ENST00000384178 104 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 RNU6-514P-201ENST00000384208 107 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 RNA5SP354-201ENST00000391247 136 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 RPL23AP36-201ENST00000413895 458 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 RNU6-625P-201ENST00000459412 107 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 AC074133.1-201ENST00000515696 183 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 AC018448.1-201ENST00000552843 316 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 AC012493.2-201ENST00000595083 291 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 AL162424.1-201ENST00000602325 221 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 U4.6-201ENST00000621618 127 ntBASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
BRPF3Q9ULD4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 RNA5SP197-201ENST00000363357 119 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.150-201ENST00000363562 102 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.270-201ENST00000364693 104 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 MIR767-201ENST00000390228 109 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 AL512633.1-201ENST00000399931 655 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.793-201ENST00000411222 111 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 RPL23AP3-201ENST00000453844 468 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.644-201ENST00000459006 113 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 snoU13.14-201ENST00000459372 104 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 AC091179.3-201ENST00000474761 144 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.674-201ENST00000516362 113 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 AC055872.1-201ENST00000570978 278 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 AL391813.1-201ENST00000603098 260 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 AL109809.4-201ENST00000603520 2185 ntBASIC4.16□□□□□ -1.74
BRPF3Q9ULD4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
BRPF3Q9ULD4 AC068647.1-201ENST00000489539 2265 ntBASIC4.15□□□□□ -1.74
BRPF3Q9ULD4 MIR410-201ENST00000362222 80 ntBASIC4.15□□□□□ -1.75
BRPF3Q9ULD4 SNORA72.2-201ENST00000365028 127 ntBASIC4.15□□□□□ -1.75
BRPF3Q9ULD4 RNU6-378P-201ENST00000384324 107 ntBASIC4.15□□□□□ -1.75
BRPF3Q9ULD4 MIR320B2-201ENST00000408479 138 ntBASIC4.15□□□□□ -1.75
BRPF3Q9ULD4 RNU6ATAC-201ENST00000408749 126 ntBASIC4.15□□□□□ -1.75
BRPF3Q9ULD4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.15□□□□□ -1.75
BRPF3Q9ULD4 AC092017.2-201ENST00000427600 362 ntBASIC4.15□□□□□ -1.75
BRPF3Q9ULD4 POLR2KP2-201ENST00000438155 177 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms